ENSGALG00000017083


Gallus gallus

Features
Gene ID: ENSGALG00000017083
  
Biological name :KATNAL1
  
Synonyms : katanin catalytic subunit A1 like 1 / KATNAL1
  
Possible biological names infered from orthology : Gm42791 / Katanin p60 ATPase-containing subunit A-like 1 / Q8K0T4 / Q9BW62
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 175241250
Gene end: 175277555
  
Corresponding Affymetrix probe sets: Gga.16694.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027543
NCBI entrez gene - 418920     See in Manteia.
RefSeq - XM_004938764
RefSeq - XM_004938765
RefSeq - XM_004938766
RefSeq - XM_015278631
RefSeq - XM_417114
RefSeq - XM_004938763
swissprot - E1BSZ5
Ensembl - ENSGALG00000017083
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 katnal1ENSDARG00000099156Danio rerio
 Q9BW62ENSG00000102781Homo sapiens
 Gm42791ENSMUSG00000106892Mus musculus
 Q8K0T4ENSMUSG00000041298Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KATNA1 / Q1HGK7 / Katanin p60 ATPase-containing subunit A1 / O75449* / katanin catalytic subunit A1*ENSGALG0000001237887
KATNAL2 / katanin catalytic subunit A1 like 2 / Q8IYT4* / Q9D3R6* / Katanin p60 ATPase-containing subunit A-like 2 *ENSGALG0000004188247
VPS4B / vacuolar protein sorting 4 homolog B / O75351* / P46467* / vacuolar protein sorting 4B*ENSGALG0000001287946
VPS4A* / Q9UN37* / Q8VEJ9* / AC026464.4* / vacuolar protein sorting 4A* / vacuolar protein sorting 4 homolog A*ENSGALG0000004071343


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR015415  Vps4 oligomerisation, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051013 microtubule severing IEA
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008568 microtubule-severing ATPase activity IEA
 molecular_functionGO:0016887 ATPase activity IBA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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