ENSG00000102781


Homo sapiens

Features
Gene ID: ENSG00000102781
  
Biological name :KATNAL1
  
Synonyms : katanin catalytic subunit A1 like 1 / KATNAL1 / Q9BW62
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 13
Strand: -1
Band: q12.3
Gene start: 30202630
Gene end: 30307484
  
Corresponding Affymetrix probe sets: 223790_at (Human Genome U133 Plus 2.0 Array)   227713_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000397776
Ensembl peptide - ENSP00000407792
Ensembl peptide - ENSP00000369989
Ensembl peptide - ENSP00000369991
NCBI entrez gene - 84056     See in Manteia.
OMIM - 614764
RefSeq - XM_017020793
RefSeq - NM_001014380
RefSeq - NM_032116
RefSeq - XM_005266574
RefSeq - XM_017020791
RefSeq - XM_017020792
RefSeq Peptide - NP_001014402
RefSeq Peptide - NP_115492
swissprot - Q5T558
swissprot - A2A3H2
swissprot - Q9BW62
swissprot - A0A024RDP8
Ensembl - ENSG00000102781
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 katnal1ENSDARG00000099156Danio rerio
 KATNAL1ENSGALG00000017083Gallus gallus
 Gm42791ENSMUSG00000106892Mus musculus
 Q8K0T4ENSMUSG00000041298Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KATNA1 / O75449 / katanin catalytic subunit A1ENSG0000018662567
VPS4A / Q9UN37 / vacuolar protein sorting 4 homolog AENSG0000013261234
AC026464.4ENSG0000026091432
VPS4B / O75351 / vacuolar protein sorting 4 homolog BENSG0000011954132
Q8IYT4 / KATNAL2 / katanin catalytic subunit A1 like 2ENSG0000016721632


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR015415  Vps4 oligomerisation, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR028594  Katanin p60 subunit A-like 1, chordates
 IPR028596  Katanin p60 subunit A1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0051013 microtubule severing IDA
 biological_processGO:0051301 cell division IEA
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IDA
 cellular_componentGO:0030496 midbody IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0008568 microtubule-severing ATPase activity IDA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016887 ATPase activity IBA
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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