ENSGALG00000040713


Gallus gallus

Features
Gene ID: ENSGALG00000040713
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : AC026464.4 / Q8VEJ9 / Q9UN37 / vacuolar protein sorting 4A / vacuolar protein sorting 4 homolog A / VPS4A
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 19169746
Gene end: 19172786
  
Corresponding Affymetrix probe sets: Gga.8207.1.S1_at (Chicken Array)   GgaAffx.25269.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045396
Ensembl peptide - ENSGALP00000056337
NCBI entrez gene - 425637     See in Manteia.
RefSeq - XM_015292679
swissprot - A0A1D5NYD8
swissprot - A0A1D5PTT7
Ensembl - ENSGALG00000040713
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vps4aENSDARG00000030114Danio rerio
 AC026464.4ENSG00000260914Homo sapiens
 VPS4AENSG00000132612Homo sapiens
 Vps4aENSMUSG00000031913Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VPS4B / vacuolar protein sorting 4 homolog B / O75351* / P46467* / vacuolar protein sorting 4B*ENSGALG0000001287974
KATNAL2 / katanin catalytic subunit A1 like 2 / Q8IYT4* / Q9D3R6* / Katanin p60 ATPase-containing subunit A-like 2 *ENSGALG0000004188235
KATNA1 / Q1HGK7 / Katanin p60 ATPase-containing subunit A1 / O75449* / katanin catalytic subunit A1*ENSGALG0000001237834
KATNAL1 / katanin catalytic subunit A1 like 1 / Q9BW62* / Q8K0T4* / Gm42791* / Katanin p60 ATPase-containing subunit A-like 1 *ENSGALG0000001708326


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR007330  MIT
 IPR015415  Vps4 oligomerisation, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0036258 multivesicular body assembly IEA
 biological_processGO:0048524 positive regulation of viral process IEA
 biological_processGO:0061738 late endosomal microautophagy IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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