ENSGALG00000017111


Gallus gallus

Features
Gene ID: ENSGALG00000017111
  
Biological name :NUP58
  
Synonyms : nucleoporin 58 / NUP58
  
Possible biological names infered from orthology : Nucleoporin p58/p45 / Nupl1 / Q8R332 / Q9BVL2
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 177067382
Gene end: 177104586
  
Corresponding Affymetrix probe sets: Gga.15659.1.S1_s_at (Chicken Array)   Gga.15659.2.S1_at (Chicken Array)   Gga.2325.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056664
Ensembl peptide - ENSGALP00000027595
NCBI entrez gene - 418937     See in Manteia.
RefSeq - XM_015278013
RefSeq - NM_001030829
RefSeq - XM_015278003
RefSeq - XM_015278007
RefSeq Peptide - NP_001026000
swissprot - A0A1D5PUQ9
swissprot - Q5ZKL1
Ensembl - ENSGALG00000017111
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nup58ENSDARG00000033965Danio rerio
 NUP58ENSG00000139496Homo sapiens
 Nupl1ENSMUSG00000114797Mus musculus
 Nupl1ENSMUSG00000063895Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR024882  Nucleoporin p58/p45


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006913 nucleocytoplasmic transport IEA
 cellular_componentGO:0005643 nuclear pore IEA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
snRNP Assembly
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of DNA replication proteins
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000004856 NUP62* / P37198* / Q63850* / nucleoporin 62* / Nuclear pore glycoprotein p62 *  / complex
 ENSGALG00000017111 NUP58 / nucleoporin 58 / Nupl1* / Q8R332* / Q9BVL2* / Nucleoporin p58/p45 *  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr