ENSGALG00000017299


Gallus gallus

Features
Gene ID: ENSGALG00000017299
  
Biological name :RPS11
  
Synonyms : RPS11
  
Possible biological names infered from orthology : P62280 / P62281 / ribosomal protein S11
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 194478143
Gene end: 194481160
  
Corresponding Affymetrix probe sets: Gga.9384.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000063062
Ensembl peptide - ENSGALP00000035595
NCBI entrez gene - 419049     See in Manteia.
RefSeq - NM_001030833
RefSeq Peptide - NP_001026004
swissprot - Q98TH5
swissprot - A0A1L1RW53
Ensembl - ENSGALG00000017299
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps11ENSDARG00000053058Danio rerio
 si:dkey-159f12.2ENSDARG00000093606Danio rerio
 RPS11ENSG00000142534Homo sapiens
 Rps11ENSMUSG00000003429Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000266  Ribosomal protein S17/S11
 IPR012340  Nucleic acid-binding, OB-fold
 IPR019979  Ribosomal protein S17, conserved site
 IPR028333  Ribosomal protein S17, archaeal/eukaryotic
 IPR032440  40S ribosomal protein S11, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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