ENSMUSG00000003429


Mus musculus

Features
Gene ID: ENSMUSG00000003429
  
Biological name :Rps11
  
Synonyms : P62281 / ribosomal protein S11 / Rps11
  
Possible biological names infered from orthology : P62280
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: B3
Gene start: 45122379
Gene end: 45124439
  
Corresponding Affymetrix probe sets: 10563094 (MoGene1.0st)   10563099 (MoGene1.0st)   10608647 (MoGene1.0st)   1424000_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000003521
Ensembl peptide - ENSMUSP00000147907
Ensembl peptide - ENSMUSP00000147630
NCBI entrez gene - 27207     See in Manteia.
MGI - MGI:1351329
RefSeq - NM_013725
RefSeq Peptide - NP_038753
swissprot - A0A1B0GRR3
swissprot - A0A1B0GSE8
swissprot - P62281
swissprot - Q3UC02
Ensembl - ENSMUSG00000003429
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rps11ENSDARG00000053058Danio rerio
 si:dkey-159f12.2ENSDARG00000093606Danio rerio
 RPS11ENSGALG00000017299Gallus gallus
 RPS11ENSG00000142534Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000266  Ribosomal protein S17/S11
 IPR012340  Nucleic acid-binding, OB-fold
 IPR019979  Ribosomal protein S17, conserved site
 IPR028333  Ribosomal protein S17, archaeal/eukaryotic
 IPR032440  40S ribosomal protein S11, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IEA
 cellular_componentGO:0031012 extracellular matrix ISO
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0019843 rRNA binding IEA


Pathways (from Reactome)
Pathway description
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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