ENSGALG00000021230


Gallus gallus

Features
Gene ID: ENSGALG00000021230
  
Biological name :EPB42
  
Synonyms : EPB42 / Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA.
  
Possible biological names infered from orthology : erythrocyte membrane protein band 4.2 / P16452 / P49222
  
Species: Gallus gallus
  
Chr. number: 20
Strand: 1
Band:
Gene start: 6889947
Gene end: 6899216
  
Corresponding Affymetrix probe sets: Gga.14069.1.S1_s_at (Chicken Array)   GgaAffx.2993.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007657
NCBI entrez gene - 419216     See in Manteia.
RefSeq - NM_001321559
RefSeq - XM_417393
RefSeq Peptide - NP_001308488
swissprot - E1BQZ4
Ensembl - ENSGALG00000021230
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tgm5lENSDARG00000098837Danio rerio
 tgm8ENSDARG00000097651Danio rerio
 EPB42ENSG00000166947Homo sapiens
 Epb42ENSMUSG00000023216Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TGM2 / protein-glutamine gamma-glutamyltransferase 2 / P21980* / P21981* / transglutaminase 2*ENSGALG0000000677536
TGM6 / transglutaminase 6 / O95932*ENSGALG0000002123234
ENSGALG0000001376233
TGM3 / transglutaminase 3 / Q08188* / Q08189* / Protein-glutamine gamma-glutamyltransferase E Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain Protein-glutamine gamma-gl...ENSGALG0000000480432
TGM4 / protein-glutamine gamma-glutamyltransferase 4 / P49221* / transglutaminase 4*ENSGALG0000003317130
F13A1 / coagulation factor XIII A chain / P00488* / Q8BH61*ENSGALG0000001280228
ENSGALG0000002587216
ENSGALG000000463008


Protein motifs (from Interpro)
Interpro ID Name
 IPR001102  Transglutaminase, N-terminal
 IPR002931  Transglutaminase-like
 IPR008958  Transglutaminase, C-terminal
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR023608  Protein-glutamine gamma-glutamyltransferase, animal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018149 peptide cross-linking IEA
 molecular_functionGO:0003810 protein-glutamine gamma-glutamyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr