ENSGALG00000012802


Gallus gallus

Features
Gene ID: ENSGALG00000012802
  
Biological name :F13A1
  
Synonyms : coagulation factor XIII A chain / F13A1
  
Possible biological names infered from orthology : P00488 / Q8BH61
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 65247235
Gene end: 65305803
  
Corresponding Affymetrix probe sets: Gga.19950.1.S1_s_at (Chicken Array)   Gga.226.1.S1_at (Chicken Array)   Gga.226.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020857
NCBI entrez gene - 395420     See in Manteia.
RefSeq - NM_204685
RefSeq Peptide - NP_990016
swissprot - E1BWG1
Ensembl - ENSGALG00000012802
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 F13A1 (1 of many)ENSDARG00000094832Danio rerio
 f13a1a.1ENSDARG00000045453Danio rerio
 f13a1bENSDARG00000036893Danio rerio
 F13A1ENSG00000124491Homo sapiens
 F13a1ENSMUSG00000039109Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TGM6 / transglutaminase 6 / O95932*ENSGALG0000002123234
TGM4 / protein-glutamine gamma-glutamyltransferase 4 / P49221* / transglutaminase 4*ENSGALG0000003317133
TGM2 / protein-glutamine gamma-glutamyltransferase 2 / P21980* / P21981* / transglutaminase 2*ENSGALG0000000677532
TGM3 / transglutaminase 3 / Q08188* / Q08189* / Protein-glutamine gamma-glutamyltransferase E Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain Protein-glutamine gamma-gl...ENSGALG0000000480432
EPB42 / Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. / P16452* / P49222* / erythrocyte membrane protein band 4.2*ENSGALG0000002123027
ENSGALG0000001376227
ENSGALG0000002587217
ENSGALG000000463007


Protein motifs (from Interpro)
Interpro ID Name
 IPR001102  Transglutaminase, N-terminal
 IPR002931  Transglutaminase-like
 IPR008958  Transglutaminase, C-terminal
 IPR013783  Immunoglobulin-like fold
 IPR013808  Transglutaminase, active site
 IPR014756  Immunoglobulin E-set
 IPR023608  Protein-glutamine gamma-glutamyltransferase, animal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007596 blood coagulation IEA
 biological_processGO:0018149 peptide cross-linking IEA
 biological_processGO:0072378 blood coagulation, fibrin clot formation IEA
 molecular_functionGO:0003810 protein-glutamine gamma-glutamyltransferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Common Pathway of Fibrin Clot Formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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