ENSGALG00000021232


Gallus gallus

Features
Gene ID: ENSGALG00000021232
  
Biological name :TGM6
  
Synonyms : TGM6 / transglutaminase 6
  
Possible biological names infered from orthology : O95932
  
Species: Gallus gallus
  
Chr. number: 20
Strand: 1
Band:
Gene start: 6871692
Gene end: 6882274
  
Corresponding Affymetrix probe sets: GgaAffx.2993.3.S1_s_at (Chicken Array)   GgaAffx.2993.6.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007659
Ensembl peptide - ENSGALP00000044181
NCBI entrez gene - 771144     See in Manteia.
RefSeq - XM_001234441
swissprot - A0A1D5NV08
swissprot - F1NG12
Ensembl - ENSGALG00000021232
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tgm5lENSDARG00000098837Danio rerio
 tgm8ENSDARG00000097651Danio rerio
 TGM6ENSG00000166948Homo sapiens
 Tgm6ENSMUSG00000027403Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TGM3 / transglutaminase 3 / Q08188* / Q08189* / Protein-glutamine gamma-glutamyltransferase E Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain Protein-glutamine gamma-gl...ENSGALG0000000480447
TGM2 / protein-glutamine gamma-glutamyltransferase 2 / P21980* / P21981* / transglutaminase 2*ENSGALG0000000677537
F13A1 / coagulation factor XIII A chain / P00488* / Q8BH61*ENSGALG0000001280235
TGM4 / protein-glutamine gamma-glutamyltransferase 4 / P49221* / transglutaminase 4*ENSGALG0000003317134
EPB42 / Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. / P16452* / P49222* / erythrocyte membrane protein band 4.2*ENSGALG0000002123033
ENSGALG0000001376233
ENSGALG0000002587225
ENSGALG0000004630014


Protein motifs (from Interpro)
Interpro ID Name
 IPR001102  Transglutaminase, N-terminal
 IPR002931  Transglutaminase-like
 IPR008958  Transglutaminase, C-terminal
 IPR013783  Immunoglobulin-like fold
 IPR013808  Transglutaminase, active site
 IPR014756  Immunoglobulin E-set
 IPR023608  Protein-glutamine gamma-glutamyltransferase, animal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018149 peptide cross-linking IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003810 protein-glutamine gamma-glutamyltransferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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