ENSG00000166948


Homo sapiens

Features
Gene ID: ENSG00000166948
  
Biological name :TGM6
  
Synonyms : O95932 / TGM6 / transglutaminase 6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: p13
Gene start: 2380908
Gene end: 2432753
  
Corresponding Affymetrix probe sets: 233983_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000202625
Ensembl peptide - ENSP00000370831
NCBI entrez gene - 343641     See in Manteia.
OMIM - 613900
RefSeq - NM_001254734
RefSeq - NM_198994
RefSeq Peptide - NP_001241663
RefSeq Peptide - NP_945345
swissprot - O95932
Ensembl - ENSG00000166948
  
Related genetic diseases (OMIM): 613908 - Spinocerebellar ataxia 35, 613908
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tgm5lENSDARG00000098837Danio rerio
 tgm8ENSDARG00000097651Danio rerio
 TGM6ENSGALG00000021232Gallus gallus
 Tgm6ENSMUSG00000027403Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TGM3 / Q08188 / transglutaminase 3ENSG0000012578050
TGM5 / O43548 / transglutaminase 5ENSG0000010405546
TGM7 / Q96PF1 / transglutaminase 7ENSG0000015949545
TGM2 / P21980 / transglutaminase 2ENSG0000019895940
TGM1 / P22735 / transglutaminase 1ENSG0000009229537
F13A1 / P00488 / coagulation factor XIII A chainENSG0000012449135
TGM4 / P49221 / transglutaminase 4ENSG0000016381034
EPB42 / P16452 / erythrocyte membrane protein band 4.2ENSG0000016694730


Protein motifs (from Interpro)
Interpro ID Name
 IPR001102  Transglutaminase, N-terminal
 IPR002931  Transglutaminase-like
 IPR008958  Transglutaminase, C-terminal
 IPR013783  Immunoglobulin-like fold
 IPR013808  Transglutaminase, active site
 IPR014756  Immunoglobulin E-set
 IPR023608  Protein-glutamine gamma-glutamyltransferase, animal
 IPR036238  Transglutaminase, C-terminal domain superfamily
 IPR036985  Transglutaminase-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018149 peptide cross-linking IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003810 protein-glutamine gamma-glutamyltransferase activity IDA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000315 Abnormality of the orbital region 
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 HP:0000467 Neck muscle weakness 
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 HP:0000473 Torticollis 
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 HP:0000641 Dysmetric saccades 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001310 Dysmetria 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0002066 Gait ataxia "Impairment of the ability to coordinate the movements required for normal walking." [HPO:curators]
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 HP:0002070 Limb ataxia 
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 HP:0002073 Progressive cerebellar ataxia 
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 HP:0002080 Intention tremor "An oscillatory cerebellar ataxia that tends to be absent when the limbs are inactive and during the first part of voluntary movement but worsening as the movement continues and greater precision is required (e.g., in touching a target such as the patient s nose or a physician s finger)." [HPO:curators]
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 HP:0002311 Incoordination 
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 HP:0002342 Mental retardation, moderate "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 35-49." [HPO:curators]
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 HP:0002355 Difficulty walking 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003581 Onset in adulthood 
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 HP:0003677 Slow progression 
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 HP:0007024 Pseudobulbar paralysis "Bilateral impairment of the function of the cranial nerves 9-12, which control musculature involved in eating, swallowing, and speech. Pseudobulbar paralysis is characterized clinically by dysarthria, dysphonia, and dysphagia with bifacial paralysis, and may be accompanied by `Pseudobulbar behavioral symptoms` (HP:0002193) such as enforced crying and laughing." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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