ENSG00000104055


Homo sapiens

Features
Gene ID: ENSG00000104055
  
Biological name :TGM5
  
Synonyms : O43548 / TGM5 / transglutaminase 5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: -1
Band: q15.2
Gene start: 43232595
Gene end: 43266857
  
Corresponding Affymetrix probe sets: 207911_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000220420
Ensembl peptide - ENSP00000482542
Ensembl peptide - ENSP00000479732
Ensembl peptide - ENSP00000479638
Ensembl peptide - ENSP00000220419
NCBI entrez gene - 9333     See in Manteia.
OMIM - 603805
RefSeq - NM_201631
RefSeq - NM_004245
RefSeq Peptide - NP_004236
RefSeq Peptide - NP_963925
swissprot - O43548
swissprot - A0A087WVW4
swissprot - A0A087WVS3
swissprot - A0A087WZC4
Ensembl - ENSG00000104055
  
Related genetic diseases (OMIM): 609796 - Peeling skin syndrome 2, 609796
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tgm5lENSDARG00000098837Danio rerio
 tgm8ENSDARG00000097651Danio rerio
 Tgm5ENSMUSG00000053675Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TGM7 / Q96PF1 / transglutaminase 7ENSG0000015949549
TGM6 / O95932 / transglutaminase 6ENSG0000016694845
TGM3 / Q08188 / transglutaminase 3ENSG0000012578043
TGM2 / P21980 / transglutaminase 2ENSG0000019895940
TGM1 / P22735 / transglutaminase 1ENSG0000009229535
F13A1 / P00488 / coagulation factor XIII A chainENSG0000012449133
TGM4 / P49221 / transglutaminase 4ENSG0000016381032
EPB42 / P16452 / erythrocyte membrane protein band 4.2ENSG0000016694731


Protein motifs (from Interpro)
Interpro ID Name
 IPR001102  Transglutaminase, N-terminal
 IPR002931  Transglutaminase-like
 IPR008958  Transglutaminase, C-terminal
 IPR013783  Immunoglobulin-like fold
 IPR013808  Transglutaminase, active site
 IPR014756  Immunoglobulin E-set
 IPR023608  Protein-glutamine gamma-glutamyltransferase, animal
 IPR036238  Transglutaminase, C-terminal domain superfamily
 IPR036985  Transglutaminase-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006464 cellular protein modification process TAS
 biological_processGO:0008544 epidermis development TAS
 biological_processGO:0018149 peptide cross-linking IEA
 biological_processGO:0070268 cornification TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane TAS
 molecular_functionGO:0003810 protein-glutamine gamma-glutamyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000953 Hyperpigmentation 
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 HP:0000964 Eczema "Eczema is a form of dermatitis. The term eczema is broadly applied to a range of persistent skin conditions and can be related to a number of underlying conditions. Manifestations of eczema can include dryness and recurring skin rashes with redness, skin edema, itching and dryness, crusting, flaking, blistering, cracking, oozing, or bleeding." [HPO:curators]
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 HP:0007605 Excessive wrinkling of palmar skin 
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0008066 Abnormal blistering of the skin 
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 HP:0008499 High-grade hypermetropia 
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 HP:0010783 Erythema "Redness of the skin, caused by hyperemia of the capillaries in the lower layers of the skin." [HPO:probinson]
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 HP:0012393 Allergy "An allergy is an immune response or reaction to substances that are usually not harmful." [HPO:probinson]
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 HP:0012733 Macule "A flat, distinct, discolored area of skin less than 1 cm wide that does not involve any change in the thickness or texture of the skin." [HPO:probinson]
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 HP:0040189 Scaling skin "Refers to the loss of the outer layer of the epidermis in large, scale-like flakes." []
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 HP:0200034 skin papules "A circumscribed, solid elevation of skin with no visible fluid, varying in size from a pinhead to less than 10mm in diameter at the widest point." [HPO:SKOEHLER]
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 HP:0200041 skin erosion "A discontinuity of the skin exhibiting incomplete loss of the epidermis, a lesion that is moist, circumscribed, and usually depressed." [HPO:SKOEHLER]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr