ENSG00000092295


Homo sapiens

Features
Gene ID: ENSG00000092295
  
Biological name :TGM1
  
Synonyms : P22735 / TGM1 / transglutaminase 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: -1
Band: q12
Gene start: 24249114
Gene end: 24264432
  
Corresponding Affymetrix probe sets: 206008_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000453701
Ensembl peptide - ENSP00000453840
Ensembl peptide - ENSP00000454070
Ensembl peptide - ENSP00000206765
Ensembl peptide - ENSP00000439446
Ensembl peptide - ENSP00000452690
Ensembl peptide - ENSP00000452822
Ensembl peptide - ENSP00000453234
Ensembl peptide - ENSP00000453337
NCBI entrez gene - 7051     See in Manteia.
OMIM - 190195
RefSeq - NM_000359
RefSeq Peptide - NP_000350
swissprot - H0YLJ6
swissprot - H0YLT9
swissprot - H0YMQ8
swissprot - H0YN27
swissprot - H0YNM4
swissprot - A0A0G2JL93
swissprot - P22735
swissprot - H0YKI6
Ensembl - ENSG00000092295
  
Related genetic diseases (OMIM): 242300 - Ichthyosis, congenital, autosomal recessive 1, 242300
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tgm1ENSDARG00000017799Danio rerio
 tgm1l1ENSDARG00000102106Danio rerio
 tgm1l2ENSDARG00000101595Danio rerio
 tgm1l3ENSDARG00000005913Danio rerio
 tgm1l4ENSDARG00000101407Danio rerio
 Tgm1ENSMUSG00000022218Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
F13A1 / P00488 / coagulation factor XIII A chainENSG0000012449138
TGM6 / O95932 / transglutaminase 6ENSG0000016694832
TGM4 / P49221 / transglutaminase 4ENSG0000016381031
TGM2 / P21980 / transglutaminase 2ENSG0000019895930
TGM5 / O43548 / transglutaminase 5ENSG0000010405530
TGM7 / Q96PF1 / transglutaminase 7ENSG0000015949530
TGM3 / Q08188 / transglutaminase 3ENSG0000012578029
EPB42 / P16452 / erythrocyte membrane protein band 4.2ENSG0000016694723


Protein motifs (from Interpro)
Interpro ID Name
 IPR001102  Transglutaminase, N-terminal
 IPR002931  Transglutaminase-like
 IPR008958  Transglutaminase, C-terminal
 IPR013783  Immunoglobulin-like fold
 IPR013808  Transglutaminase, active site
 IPR014756  Immunoglobulin E-set
 IPR023608  Protein-glutamine gamma-glutamyltransferase, animal
 IPR036238  Transglutaminase, C-terminal domain superfamily
 IPR036985  Transglutaminase-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006464 cellular protein modification process NAS
 biological_processGO:0010838 positive regulation of keratinocyte proliferation IMP
 biological_processGO:0018149 peptide cross-linking IEA
 biological_processGO:0030216 keratinocyte differentiation IDA
 biological_processGO:0031424 keratinization IEA
 biological_processGO:0043163 cell envelope organization TAS
 biological_processGO:0045787 positive regulation of cell cycle IMP
 biological_processGO:0070268 cornification TAS
 cellular_componentGO:0001533 cornified envelope TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031224 intrinsic component of membrane IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003810 protein-glutamine gamma-glutamyltransferase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Formation of the cornified envelope


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000083 Renal failure 
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 HP:0000164 Abnormality of the teeth "Any abnormality of the primary (deciduous) or permanent teeth." [HPO:curators]
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 HP:0000232 Everted lower lip 
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 HP:0000365 Hearing loss 
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 HP:0000389 Chronic otitis media 
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 HP:0000491 Keratitis "Inflammation of the cornea." [HPO:curators]
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 HP:0000656 Ectropion "An abnormal turning outward of the lower eyelid." [HPO:sdoelken]
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 HP:0000958 Dry skin 
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 HP:0000962 Hyperkeratosis "Hyperkeratosis is thickening of the outer layer of the skin, the stratum corneum, which is composed of large, polyhedral, plate-like envelopes filled with keratin which are the dead cells that have migrated up from the stratum granulosum." [HPO:curators]
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 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
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 HP:0000972 Palmoplantar hyperkeratosis "`Hyperkeratosis` (HP:0000962) affecting the palm of the hand and the sole of the foot." [HPO:probinson]
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 HP:0000982 Palmoplantar keratoderma 
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 HP:0000989 Pruritus "Pruritus is an itch or a sensation that makes a person want to scratch. This term refers to an abnormally increased disposition to experience pruritus." [HPO:curators]
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 HP:0001006 Hypotrichosis "Reduced or lacking hair growth." [HPO:curators]
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 HP:0001019 Erythroderma "An inflammatory exfoliative dermatosis involving nearly all of the surface of the skin. Erythroderma develops suddenly. A patchy erythema may generalize and spread to affect most of the skin. Scaling may appear in 2-6 days and be accompanied by hot, red, dry skin, malaise, and fever." [HPO:probinson]
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 HP:0001371 Contractures 
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 HP:0001376 Decreased mobility of joints 
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 HP:0001508 Failure to thrive 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001597 Abnormality of the nails "Abnormality of the fingernails or toenails." [HPO:curators]
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 HP:0001944 Dehydration 
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 HP:0002164 Nail dysplasia 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0007431 Congenital ichthyosiform erythroderma 
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 HP:0007549 Desquamation of skin soon after birth 
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0008070 Sparse hair 
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 HP:0008404 Nail dystrophy, variable 
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 HP:0011039 Abnormality of the helix "An abnormality of the `helix` (FMA:60992)." [HPO:probinson]
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 HP:0025092 Epidermal acanthosis "Diffuse hypertrophy or thickening of the stratum spinosum of the epidermis (prickle cell layer of the skin)." []
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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 HP:0100679 Lack of skin elasticity 
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 HP:0100758 Gangrene "A serious and potentially life-threatening condition that arises when a considerable mass of body tissue dies (necrosis)." [ISBN:9780781770873]
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 HP:0100806 Sepsis 
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 HP:0100840 Aplasia/Hypoplasia of the eyebrow "Absence or underdevelopment of the eyebrow." [HPO:probinson]
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 HP:0200020 Corneal erosions "Erosions or Abbrasions of the cornea s outermost layer of epithelial cells." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000163207 IVL / P07476 / involucrin  / complex / reaction
 ENSG00000167880 EVPL / Q92817 / envoplakin  / complex
 ENSG00000118898 PPL / O60437 / periplakin  / complex






 

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