ENSG00000125780


Homo sapiens

Features
Gene ID: ENSG00000125780
  
Biological name :TGM3
  
Synonyms : Q08188 / TGM3 / transglutaminase 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: p13
Gene start: 2296001
Gene end: 2341078
  
Corresponding Affymetrix probe sets: 206004_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000370867
NCBI entrez gene - 7053     See in Manteia.
OMIM - 600238
RefSeq - NM_003245
RefSeq Peptide - NP_003236
swissprot - Q08188
Ensembl - ENSG00000125780
  
Related genetic diseases (OMIM): 617251 - ?Uncombable hair syndrome 2, 617251
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tgm5lENSDARG00000098837Danio rerio
 tgm8ENSDARG00000097651Danio rerio
 TGM3ENSGALG00000004804Gallus gallus
 Tgm3ENSMUSG00000027401Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TGM6 / O95932 / transglutaminase 6ENSG0000016694851
TGM5 / O43548 / transglutaminase 5ENSG0000010405545
TGM7 / Q96PF1 / transglutaminase 7ENSG0000015949540
TGM2 / P21980 / transglutaminase 2ENSG0000019895937
TGM1 / P22735 / transglutaminase 1ENSG0000009229534
TGM4 / P49221 / transglutaminase 4ENSG0000016381033
F13A1 / P00488 / coagulation factor XIII A chainENSG0000012449133
EPB42 / P16452 / erythrocyte membrane protein band 4.2ENSG0000016694730


Protein motifs (from Interpro)
Interpro ID Name
 IPR001102  Transglutaminase, N-terminal
 IPR002931  Transglutaminase-like
 IPR008958  Transglutaminase, C-terminal
 IPR013783  Immunoglobulin-like fold
 IPR013808  Transglutaminase, active site
 IPR014756  Immunoglobulin E-set
 IPR023608  Protein-glutamine gamma-glutamyltransferase, animal
 IPR036238  Transglutaminase, C-terminal domain superfamily
 IPR036985  Transglutaminase-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006464 cellular protein modification process NAS
 biological_processGO:0018149 peptide cross-linking IDA
 biological_processGO:0030216 keratinocyte differentiation TAS
 biological_processGO:0031069 hair follicle morphogenesis TAS
 biological_processGO:0031424 keratinization IEA
 biological_processGO:0043163 cell envelope organization IDA
 biological_processGO:0051262 protein tetramerization IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0031234 extrinsic component of cytoplasmic side of plasma membrane IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003810 protein-glutamine gamma-glutamyltransferase activity IDA
 molecular_functionGO:0003824 catalytic activity IDA
 molecular_functionGO:0005509 calcium ion binding IDA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups TAS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001118 Juvenile cataracts 
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 HP:0002208 Coarse hair 
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 HP:0002224 Woolly hair 
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 HP:0002229 Alopecia areata 
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 HP:0002235 Pili canaliculi "Uncombable hair." [HPO:probinson]
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 HP:0002552 Trichodysplasia 
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 HP:0003593 Early onset 
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 HP:0011364 White hair "Hypopigmented hair that appears white." [DDD:cmoss]
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 HP:0030056 Uncombable hair "Hair that is disorderly, stands out from the scalp, and cannot be combed flat." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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