ENSDARG00000098837


Danio rerio

Features
Gene ID: ENSDARG00000098837
  
Biological name :tgm5l
  
Synonyms : tgm5l / transglutaminase 5, like
  
Possible biological names infered from orthology : EPB42 / erythrocyte membrane protein band 4.2 / O43548 / O95932 / P16452 / P49222 / Protein-glutamine gamma-glutamyltransferase 5 / Protein-glutamine gamma-glutamyltransferase E Protein-glutamine gamma-glutamyltransferase E 50 kDa catalytic chain Protein-glutamine gamma-glutamyltransferase E 27 kDa non-catalytic chain / protein-glutamine gamma-glutamyltransferase Z / Q08188 / Q08189 / Q96PF1 / Q9D7I9 / TGM3 / TGM5 / TGM6 / TGM7 / transglutaminase 3 / transglutaminase 5 / transglutaminase 6 / transglutaminase 7
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 2145564
Gene end: 2162446
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000130166
Ensembl peptide - ENSDARP00000133658
NCBI entrez gene - 565984     See in Manteia.
RefSeq - NM_001326491
RefSeq Peptide - NP_001313420
swissprot - A0A0R4IGK8
swissprot - A0A0R4IBE4
ZFIN ID - ZDB-GENE-110411-176
Ensembl - ENSDARG00000098837
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000013762Gallus gallus
 ENSGALG00000025872Gallus gallus
 ENSGALG00000046300Gallus gallus
 EPB42ENSGALG00000021230Gallus gallus
 TGM3ENSGALG00000004804Gallus gallus
 TGM6ENSGALG00000021232Gallus gallus
 EPB42ENSG00000166947Homo sapiens
 TGM3ENSG00000125780Homo sapiens
 TGM5ENSG00000104055Homo sapiens
 TGM6ENSG00000166948Homo sapiens
 TGM7ENSG00000159495Homo sapiens
 Epb42ENSMUSG00000023216Mus musculus
 Tgm3ENSMUSG00000027401Mus musculus
 Tgm5ENSMUSG00000053675Mus musculus
 Tgm6ENSMUSG00000027403Mus musculus
 Tgm7ENSMUSG00000079103Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tgm2a / transglutaminase 2, C polypeptide A / TGM2* / P21981* / P21980* / transglutaminase 2* / Protein-glutamine gamma-glutamyltransferase 2 *ENSDARG0000007015734
tgm2b / transglutaminase 2b / TGM2* / P21981* / P21980* / transglutaminase 2* / Protein-glutamine gamma-glutamyltransferase 2 *ENSDARG0000007409433
tgm1l4 / transglutaminase 1 like 4 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000010140733
tgm2l / transglutaminase 2, likeENSDARG0000009338132
tgm1l1 / transglutaminase 1 like 1 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000010210631
f13a1b / coagulation factor XIII, A1 polypeptide b / F13A1* / P00488* / Q8BH61* / coagulation factor XIII A chain*ENSDARG0000003689331
tgm1 / transglutaminase 1, K polypeptide / P22735* / transglutaminase 1*ENSDARG0000001779931
tgm1l2 / transglutaminase 1 like 2 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000010159530
f13a1a.1 / coagulation factor XIII, A1 polypeptide a, tandem duplicate 1 / F13A1* / P00488* / Q8BH61* / coagulation factor XIII A chain*ENSDARG0000004545330
tgm1l3 / transglutaminase 1 like 3 / TGM1* / P22735* / transglutaminase 1*ENSDARG0000000591327
F13A1 (1 of many) / coagulation factor XIII A chain / F13A1* / P00488*ENSDARG0000009483223
tgm8 / transglutaminase 8 / TGM7* / TGM6* / TGM3* / TGM5* / EPB42* / Q08189* / Q96PF1* / O43548* / Q9D7I9* / O95932* / P16452* / P49222* / Q08188* / transglutaminase 6* / transglutaminase 7...ENSDARG0000009765116


Protein motifs (from Interpro)
Interpro ID Name
 IPR001102  Transglutaminase, N-terminal
 IPR002931  Transglutaminase-like
 IPR008958  Transglutaminase, C-terminal
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR023608  Protein-glutamine gamma-glutamyltransferase, animal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0018149 peptide cross-linking IEA
 molecular_functionGO:0003810 protein-glutamine gamma-glutamyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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