ENSGALG00000023440


Gallus gallus

Features
Gene ID: ENSGALG00000023440
  
Biological name :GABPB1
  
Synonyms : GA-binding protein subunit beta-1 isoform 1 / GABPB1
  
Possible biological names infered from orthology : GA-binding protein subunit beta-1 / GA binding protein transcription factor beta subunit 1 / Q00420 / Q06547
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 10854224
Gene end: 10873634
  
Corresponding Affymetrix probe sets: Gga.19219.1.S1_at (Chicken Array)   Gga.4929.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000037959
Ensembl peptide - ENSGALP00000055142
NCBI entrez gene - 415453     See in Manteia.
RefSeq - NM_001005816
RefSeq - NM_001012622
RefSeq Peptide - NP_001005816
RefSeq Peptide - NP_001012640
swissprot - Q5ZLM7
swissprot - F1NXL3
Ensembl - ENSGALG00000023440
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gabpb1ENSDARG00000023659Danio rerio
 GABPB1ENSG00000104064Homo sapiens
 Gabpb1ENSMUSG00000027361Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GABPB2 / GA binding protein transcription factor beta subunit 2 / P81069* / Q8TAK5* / GA-binding protein subunit beta-2 *ENSGALG0000002673446


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
Transcriptional activation of mitochondrial biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr