ENSG00000104064


Homo sapiens

Features
Gene ID: ENSG00000104064
  
Biological name :GABPB1
  
Synonyms : GA binding protein transcription factor beta subunit 1 / GABPB1 / Q06547
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: -1
Band: q21.2
Gene start: 50275392
Gene end: 50355408
  
Corresponding Affymetrix probe sets: 204618_s_at (Human Genome U133 Plus 2.0 Array)   206173_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000453578
Ensembl peptide - ENSP00000453463
Ensembl peptide - ENSP00000453806
Ensembl peptide - ENSP00000454211
Ensembl peptide - ENSP00000220429
Ensembl peptide - ENSP00000351923
Ensembl peptide - ENSP00000370259
Ensembl peptide - ENSP00000379728
Ensembl peptide - ENSP00000395771
Ensembl peptide - ENSP00000442500
NCBI entrez gene - 2553     See in Manteia.
OMIM - 600610
RefSeq - XM_017022054
RefSeq - NM_001320910
RefSeq - NM_001320915
RefSeq - NM_002041
RefSeq - NM_005254
RefSeq - NM_016654
RefSeq - NM_016655
RefSeq - NM_181427
RefSeq - XM_005254274
RefSeq - XM_011521426
RefSeq - XM_017022053
RefSeq Peptide - NP_001307844
RefSeq Peptide - NP_001307839
RefSeq Peptide - NP_002032
RefSeq Peptide - NP_005245
RefSeq Peptide - NP_057738
RefSeq Peptide - NP_057739
RefSeq Peptide - NP_852092
swissprot - H0YNZ0
swissprot - A0A024R5R5
swissprot - A0A024R5X6
swissprot - F5H7I4
swissprot - H0YMZ5
swissprot - Q06547
swissprot - H9ZYI9
Ensembl - ENSG00000104064
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gabpb1ENSDARG00000023659Danio rerio
 GABPB1ENSGALG00000023440Gallus gallus
 Gabpb1ENSMUSG00000027361Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GABPB2 / Q8TAK5 / GA binding protein transcription factor beta subunit 2ENSG0000014345868
Q53RE8 / ANKRD39 / ankyrin repeat domain 39ENSG0000021333711


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0007005 mitochondrion organization TAS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IDA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0044212 transcription regulatory region DNA binding IDA
 molecular_functionGO:0046982 protein heterodimerization activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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