ENSG00000143458


Homo sapiens

Features
Gene ID: ENSG00000143458
  
Biological name :GABPB2
  
Synonyms : GA binding protein transcription factor beta subunit 2 / GABPB2 / Q8TAK5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q21.3
Gene start: 151070578
Gene end: 151125542
  
Corresponding Affymetrix probe sets: 228466_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000357914
Ensembl peptide - ENSP00000357912
NCBI entrez gene - 126626     See in Manteia.
RefSeq - NM_001323908
RefSeq - NM_001323909
RefSeq - NM_001323910
RefSeq - NM_001323911
RefSeq - NM_001323912
RefSeq - NM_001323913
RefSeq - NM_144618
RefSeq - XM_017000254
RefSeq - NM_001323906
RefSeq - NM_001323907
RefSeq - XM_017000246
RefSeq - XM_017000247
RefSeq - XM_017000248
RefSeq - XM_017000249
RefSeq - XM_017000250
RefSeq - XM_017000251
RefSeq - XM_017000252
RefSeq - XM_017000253
RefSeq Peptide - NP_653219
RefSeq Peptide - NP_001310841
RefSeq Peptide - NP_001310842
RefSeq Peptide - NP_001310835
RefSeq Peptide - NP_001310836
RefSeq Peptide - NP_001310837
RefSeq Peptide - NP_001310838
RefSeq Peptide - NP_001310839
RefSeq Peptide - NP_001310840
swissprot - Q8TAK5
swissprot - Q5SZG2
Ensembl - ENSG00000143458
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gabpb2aENSDARG00000007943Danio rerio
 gabpb2bENSDARG00000054344Danio rerio
 GABPB2ENSGALG00000026734Gallus gallus
 Gabpb2ENSMUSG00000038766Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GABPB1 / Q06547 / GA binding protein transcription factor beta subunit 1ENSG0000010406460
Q53RE8 / ANKRD39 / ankyrin repeat domain 39ENSG0000021333710


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR036770  Ankyrin repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IDA
 molecular_functionGO:0046982 protein heterodimerization activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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