ENSDARG00000023659


Danio rerio

Features
Gene ID: ENSDARG00000023659
  
Biological name :gabpb1
  
Synonyms : GA binding protein transcription factor, beta subunit 1 / gabpb1
  
Possible biological names infered from orthology : GA-binding protein subunit beta-1 / Q00420 / Q06547
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 81867
Gene end: 92046
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000044386
Ensembl peptide - ENSDARP00000138165
swissprot - A0A0R4ITI0
swissprot - F1QYP3
ZFIN ID - ZDB-GENE-061027-46
Ensembl - ENSDARG00000023659
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GABPB1ENSGALG00000023440Gallus gallus
 GABPB1ENSG00000104064Homo sapiens
 Gabpb1ENSMUSG00000027361Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gabpb2a / GA binding protein transcription factor, beta subunit 2a / Q8TAK5* / GABPB2* / P81069* / GA-binding protein subunit beta-2 * / GA binding protein transcription factor beta subunit 2*ENSDARG0000000794354
gabpb2b / GA binding protein transcription factor, beta subunit 2b / Q8TAK5* / GABPB2* / P81069* / GA-binding protein subunit beta-2 * / GA binding protein transcription factor beta subunit 2*ENSDARG0000005434452
ankrd39 / ankyrin repeat domain 39 / Q53RE8* / Q9D2X0* / Ankyrin repeat domain-containing protein 39 *ENSDARG0000004135012


Protein motifs (from Interpro)
Interpro ID Name
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
Transcriptional activation of mitochondrial biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr