ENSGALG00000026903


Gallus gallus

Features
Gene ID: ENSGALG00000026903
  
Biological name :CALB2
  
Synonyms : CALB2 / Calretinin / P07090
  
Possible biological names infered from orthology : calbindin 2 / P22676 / Q08331
  
Species: Gallus gallus
  
Chr. number: 11
Strand: -1
Band:
Gene start: 1547073
Gene end: 1551636
  
Corresponding Affymetrix probe sets: Gga.4978.2.S1_a_at (Chicken Array)   Gga.4978.3.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041715
NCBI entrez gene - 396255     See in Manteia.
RefSeq - NM_205316
RefSeq Peptide - NP_990647
swissprot - P07090
swissprot - R4GHZ6
Ensembl - ENSGALG00000026903
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 calb2aENSDARG00000041062Danio rerio
 calb2bENSDARG00000036344Danio rerio
 CALB2ENSG00000172137Homo sapiens
 Calb2ENSMUSG00000003657Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CALB1 / P04354 / Calbindin / P05937* / P12658* / calbindin 1*ENSGALG0000003228257
SCGN / secretagogin, EF-hand calcium binding protein / O76038* / Q91WD9* / Secretagogin *ENSGALG0000001359841


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR029646  Calretinin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051480 regulation of cytosolic calcium ion concentration IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005921 gap junction IEA
 cellular_componentGO:0043005 neuron projection IBA
 cellular_componentGO:0045202 synapse IBA
 molecular_functionGO:0005509 calcium ion binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr