ENSGALG00000026999


Gallus gallus

Features
Gene ID: ENSGALG00000026999
  
Biological name :SNRPB2
  
Synonyms : small nuclear ribonucleoprotein polypeptide B2 / SNRPB2
  
Possible biological names infered from orthology : P08579 / Q9CQI7 / U2 small nuclear ribonucleoprotein B
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 5659833
Gene end: 5666788
  
Corresponding Affymetrix probe sets: Gga.4634.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041366
NCBI entrez gene - 421261     See in Manteia.
RefSeq - XM_419331
swissprot - R4GH36
Ensembl - ENSGALG00000026999
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snrpb2ENSDARG00000039424Danio rerio
 P08579ENSG00000125870Homo sapiens
 Q9CQI7ENSMUSG00000008333Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005681 spliceosomal complex IEA
 cellular_componentGO:0005685 U1 snRNP IBA
 cellular_componentGO:0005686 U2 snRNP IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0071007 U2-type catalytic step 2 spliceosome IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0030619 U1 snRNA binding IBA
 molecular_functionGO:0035614 snRNA stem-loop binding IBA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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