ENSGALG00000027144


Gallus gallus

Features
Gene ID: ENSGALG00000027144
  
Biological name :PTF1A
  
Synonyms : pancreas specific transcription factor, 1a / PTF1A
  
Possible biological names infered from orthology : Q7RTS3 / Q9QX98
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 17418895
Gene end: 17420376
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000041335
NCBI entrez gene - 107052623     See in Manteia.
RefSeq - XM_015282155
swissprot - R4GH07
Ensembl - ENSGALG00000027144
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptf1aENSDARG00000014479Danio rerio
 PTF1AENSG00000168267Homo sapiens
 Ptf1aENSMUSG00000026735Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FERD3L / Fer3 like bHLH transcription factor / Q923Z4* / Q96RJ6* / Fer3-like protein *ENSGALG0000001086218


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0009888 tissue development IEA
 biological_processGO:0010842 retina layer formation IEA
 biological_processGO:0021549 cerebellum development IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030902 hindbrain development IEA
 biological_processGO:0031016 pancreas development IEA
 biological_processGO:0035881 amacrine cell differentiation IEA
 biological_processGO:0045165 cell fate commitment IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048384 retinoic acid receptor signaling pathway IEA
 biological_processGO:0048663 neuron fate commitment IEA
 biological_processGO:0048699 generation of neurons IEA
 biological_processGO:0060042 retina morphogenesis in camera-type eye IEA
 biological_processGO:0061074 regulation of neural retina development IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA
 molecular_functionGO:0070888 E-box binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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