ENSGALG00000027242


Gallus gallus

Features
Gene ID: ENSGALG00000027242
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Q15361 / Q62187 / transcription termination factor 1 / transcription termination factor, RNA polymerase I / TTF1
  
Species: Gallus gallus
  
Chr. number: 17
Strand: -1
Band:
Gene start: 6997611
Gene end: 7000968
  
Corresponding Affymetrix probe sets: Gga.11471.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043200
swissprot - R4GLV7
Ensembl - ENSGALG00000027242
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch73-376l24.2ENSDARG00000092508Danio rerio
 si:ch73-376l24.3ENSDARG00000094043Danio rerio
 si:ch73-376l24.4ENSDARG00000093403Danio rerio
 si:ch73-376l24.6ENSDARG00000093999Danio rerio
 si:ch73-37h15.2ENSDARG00000094107Danio rerio
 ttf1ENSDARG00000091967Danio rerio
 TTF1ENSG00000125482Homo sapiens
 Ttf1ENSMUSG00000026803Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DMTF1 / cyclin D binding myb like transcription factor 1 / Q8CE22* / Q9Y222* / 4932411N23Rik* / RIKEN cDNA 4932411N23 gene*ENSGALG0000003084424


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR017930  Myb domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0030154 cell differentiation IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0001135 transcription factor activity, RNA polymerase II transcription factor recruiting IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IBA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IBA


Pathways (from Reactome)
Pathway description
Surfactant metabolism
RNA Polymerase I Transcription Initiation
RNA Polymerase I Transcription Termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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