ENSGALG00000027989


Gallus gallus

Features
Gene ID: ENSGALG00000027989
  
Biological name :SBDS
  
Synonyms : Q5ZIY4 / Ribosome maturation protein SBDS / SBDS
  
Possible biological names infered from orthology : P70122 / Q9Y3A5 / SBDS, ribosome maturation factor
  
Species: Gallus gallus
  
Chr. number: 19
Strand: -1
Band:
Gene start: 808562
Gene end: 813588
  
Corresponding Affymetrix probe sets: Gga.2272.1.S1_s_at (Chicken Array)   GgaAffx.12753.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041256
NCBI entrez gene - 417477     See in Manteia.
RefSeq - NM_001006211
RefSeq Peptide - NP_001006211
swissprot - Q5ZIY4
Ensembl - ENSGALG00000027989
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sbdsENSDARG00000027803Danio rerio
 SBDSENSG00000126524Homo sapiens
 SbdsENSMUSG00000025337Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002140  Ribosome maturation protein Sdo1/SBDS
 IPR018023  Ribosome maturation protein SBDS, conserved site
 IPR018978  Ribosome maturation protein SBDS, C-terminal
 IPR019783  Ribosome maturation protein SBDS, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001833 inner cell mass cell proliferation IEA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0007052 mitotic spindle organization IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0030282 bone mineralization IEA
 biological_processGO:0030595 leukocyte chemotaxis IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0042256 mature ribosome assembly ISS
 biological_processGO:0048539 bone marrow development IEA
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0019843 rRNA binding IEA
 molecular_functionGO:0043022 ribosome binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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