ENSGALG00000028626


Gallus gallus

Features
Gene ID: ENSGALG00000028626
  
Biological name :DCLRE1B
  
Synonyms : 5 exonuclease Apollo / DCLRE1B
  
Possible biological names infered from orthology : DNA cross-link repair 1B / Q8C7W7 / Q9H816
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 3770574
Gene end: 3773417
  
Corresponding Affymetrix probe sets: Gga.12786.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041920
NCBI entrez gene - 428269     See in Manteia.
RefSeq - NM_001031500
RefSeq Peptide - NP_001026671
swissprot - R4GII3
Ensembl - ENSGALG00000028626
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 B0V2S2ENSDARG00000068833Danio rerio
 Q9H816ENSG00000118655Homo sapiens
 Q8C7W7ENSMUSG00000027845Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DCLRE1C / protein artemis / Q8K4J0* / Q96SD1* / DNA cross-link repair 1C*ENSGALG0000001392622
DCLRE1A / DNA cross-link repair 1A protein / Q6PJP8* / DNA cross-link repair 1A*ENSGALG000000089389


Protein motifs (from Interpro)
Interpro ID Name
 IPR001279  Metallo-beta-lactamase
 IPR011084  DNA repair metallo-beta-lactamase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000075 cell cycle checkpoint IEA
 biological_processGO:0000723 telomere maintenance IEA
 biological_processGO:0006303 double-strand break repair via nonhomologous end joining IBA
 biological_processGO:0010833 telomere maintenance via telomere lengthening IEA
 biological_processGO:0016233 telomere capping IEA
 biological_processGO:0031627 telomeric loop formation IEA
 biological_processGO:0031848 protection from non-homologous end joining at telomere IEA
 biological_processGO:0031860 telomeric 3" overhang formation IEA
 biological_processGO:0036297 interstrand cross-link repair IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0000781 chromosome, telomeric region IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0003684 damaged DNA binding IBA
 molecular_functionGO:0008409 5"-3" exonuclease activity IEA
 molecular_functionGO:0035312 5"-3" exodeoxyribonuclease activity IBA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0044877 protein-containing complex binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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