ENSGALG00000028994


Gallus gallus

Features
Gene ID: ENSGALG00000028994
  
Biological name :SAP30L
  
Synonyms : SAP30L / SAP30 like
  
Possible biological names infered from orthology : Histone deacetylase complex subunit SAP30L / Q5SQF8 / Q9HAJ7
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 12146904
Gene end: 12152729
  
Corresponding Affymetrix probe sets: Gga.14025.1.S1_at (Chicken Array)   GgaAffx.2486.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043035
Ensembl peptide - ENSGALP00000051775
NCBI entrez gene - 416259     See in Manteia.
RefSeq - XM_001233439
swissprot - A0A1D5PG55
swissprot - R4GLF5
Ensembl - ENSGALG00000028994
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6NYV5ENSDARG00000030213Danio rerio
 Q9HAJ7ENSG00000164576Homo sapiens
 Q5SQF8ENSMUSG00000020519Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SAP30 / Sin3A associated protein 30 / O75446* / O88574* / Histone deacetylase complex subunit SAP30 *ENSGALG0000003625271


Protein motifs (from Interpro)
Interpro ID Name
 IPR024145  Histone deacetylase complex subunit SAP30/SAP30-like
 IPR025717  Histone deacetylase complex subunit SAP30 zinc-finger
 IPR025718  Histone deacetylase complex subunit SAP30, Sin3 binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0016575 histone deacetylation IEA
 cellular_componentGO:0000118 histone deacetylase complex IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0004407 histone deacetylase activity IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0010314 phosphatidylinositol-5-phosphate binding IEA
 molecular_functionGO:0031491 nucleosome binding IEA
 molecular_functionGO:0042393 histone binding IEA
 molecular_functionGO:0044378 non-sequence-specific DNA binding, bending IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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