ENSGALG00000029024


Gallus gallus

Features
Gene ID: ENSGALG00000029024
  
Biological name :TCF21
  
Synonyms : TCF21 / transcription factor 21
  
Possible biological names infered from orthology : O35437 / O43680
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 56452905
Gene end: 56455090
  
Corresponding Affymetrix probe sets: Gga.8241.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043006
NCBI entrez gene - 421697     See in Manteia.
RefSeq - NM_001277711
RefSeq Peptide - NP_001264640
swissprot - R4GLC9
Ensembl - ENSGALG00000029024
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tcf21ENSDARG00000036869Danio rerio
 TCF21ENSG00000118526Homo sapiens
 Tcf21ENSMUSG00000045680Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MSC / musculin / O60682* / O88940*ENSGALG0000003777755


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001657 ureteric bud development IEA
 biological_processGO:0001658 branching involved in ureteric bud morphogenesis IEA
 biological_processGO:0001763 morphogenesis of a branching structure IEA
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0001944 vasculature development IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007530 sex determination IEA
 biological_processGO:0007548 sex differentiation IEA
 biological_processGO:0009887 animal organ morphogenesis IEA
 biological_processGO:0014707 branchiomeric skeletal muscle development IEA
 biological_processGO:0030855 epithelial cell differentiation IEA
 biological_processGO:0032835 glomerulus development IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048286 lung alveolus development IEA
 biological_processGO:0048536 spleen development IEA
 biological_processGO:0048557 embryonic digestive tract morphogenesis ISS
 biological_processGO:0048608 reproductive structure development IEA
 biological_processGO:0048732 gland development ISS
 biological_processGO:0060008 Sertoli cell differentiation ISS
 biological_processGO:0060021 roof of mouth development IEA
 biological_processGO:0060425 lung morphogenesis IEA
 biological_processGO:0060426 lung vasculature development IEA
 biological_processGO:0060435 bronchiole development IEA
 biological_processGO:0060539 diaphragm development IEA
 biological_processGO:0060541 respiratory system development IEA
 biological_processGO:0060766 negative regulation of androgen receptor signaling pathway IEA
 biological_processGO:0072162 metanephric mesenchymal cell differentiation IEA
 biological_processGO:0072277 metanephric glomerular capillary formation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0042826 histone deacetylase binding IEA
 molecular_functionGO:0043425 bHLH transcription factor binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA
 molecular_functionGO:0050681 androgen receptor binding IEA
 molecular_functionGO:0070888 E-box binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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