ENSGALG00000029536


Gallus gallus

Features
Gene ID: ENSGALG00000029536
  
Biological name :VPS11
  
Synonyms : VPS11 / VPS11, CORVET/HOPS core subunit
  
Possible biological names infered from orthology : Q91W86 / Q9H270
  
Species: Gallus gallus
  
Chr. number: 24
Strand: -1
Band:
Gene start: 46952
Gene end: 57624
  
Corresponding Affymetrix probe sets: Gga.7869.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055247
Ensembl peptide - ENSGALP00000056078
NCBI entrez gene - 419702     See in Manteia.
RefSeq - XM_004947914
swissprot - A0A1D5PQT0
swissprot - A0A1D5PT37
Ensembl - ENSGALG00000029536
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vps11ENSDARG00000036338Danio rerio
 VPS11ENSG00000160695Homo sapiens
 Vps11ENSMUSG00000032127Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000547  Clathrin, heavy chain/VPS, 7-fold repeat
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016024  Armadillo-type fold
 IPR016528  Vacuolar protein sorting-associated protein 11
 IPR017986  WD40-repeat-containing domain
 IPR024763  Vacuolar protein sorting protein 11, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:1901998 toxin transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005884 actin filament IEA
 cellular_componentGO:0030123 AP-3 adaptor complex IEA
 cellular_componentGO:0033263 CORVET complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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