ENSGALG00000030979


Gallus gallus

Features
Gene ID: ENSGALG00000030979
  
Biological name :MKS1
  
Synonyms : Meckel syndrome, type 1 / MKS1
  
Possible biological names infered from orthology : Meckel syndrome type 1 protein homolog / Q5SW45 / Q9NXB0
  
Species: Gallus gallus
  
Chr. number: 19
Strand: -1
Band:
Gene start: 145261
Gene end: 156228
  
Corresponding Affymetrix probe sets: Gga.16358.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049075
Ensembl peptide - ENSGALP00000063789
Ensembl peptide - ENSGALP00000058264
Ensembl peptide - ENSGALP00000049573
NCBI entrez gene - 417457     See in Manteia.
RefSeq - XM_415705
swissprot - A0A1L1RY66
swissprot - A0A1D5PZ55
swissprot - A0A1D5P8M6
Ensembl - ENSGALG00000030979
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mks1ENSDARG00000059657Danio rerio
 MKS1ENSG00000011143Homo sapiens
 Mks1ENSMUSG00000034121Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR010796  B9 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001843 neural tube closure IEA
 biological_processGO:0007368 determination of left/right symmetry IEA
 biological_processGO:0008589 regulation of smoothened signaling pathway IEA
 biological_processGO:0010669 epithelial structure maintenance IEA
 biological_processGO:0042733 embryonic digit morphogenesis IEA
 biological_processGO:0044458 motile cilium assembly IEA
 biological_processGO:0048706 embryonic skeletal system development IEA
 biological_processGO:0048754 branching morphogenesis of an epithelial tube IEA
 biological_processGO:0060122 inner ear receptor cell stereocilium organization IEA
 biological_processGO:0060271 cilium assembly IEA
 biological_processGO:0060322 head development IEA
 biological_processGO:0060828 regulation of canonical Wnt signaling pathway IEA
 biological_processGO:0061009 common bile duct development IEA
 biological_processGO:1901620 regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning IEA
 biological_processGO:1905515 non-motile cilium assembly IEA
 biological_processGO:1990403 embryonic brain development IEA
 biological_processGO:2000095 regulation of Wnt signaling pathway, planar cell polarity pathway IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0035869 ciliary transition zone IEA
 cellular_componentGO:0036038 MKS complex IEA
 cellular_componentGO:0036064 ciliary basal body IEA


Pathways (from Reactome)
Pathway description
Hedgehog off state
Anchoring of the basal body to the plasma membrane
Hedgehog on state


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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