ENSGALG00000031282


Gallus gallus

Features
Gene ID: ENSGALG00000031282
  
Biological name :UBR5
  
Synonyms : ubiquitin protein ligase E3 component n-recognin 5 / UBR5
  
Possible biological names infered from orthology : O95071
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 129708232
Gene end: 129786771
  
Corresponding Affymetrix probe sets: Gga.1293.1.S1_at (Chicken Array)   Gga.1293.3.S1_a_at (Chicken Array)   GgaAffx.25297.1.S1_at (Chicken Array)   GgaAffx.8941.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052001
NCBI entrez gene - 420252     See in Manteia.
RefSeq - XM_015282994
RefSeq - XM_015282995
RefSeq - XM_015282996
RefSeq - XM_015282997
RefSeq - XM_015282998
RefSeq - XM_015282999
RefSeq - XM_015283000
RefSeq - XM_015283001
RefSeq - XM_015283002
RefSeq - XM_015282993
swissprot - A0A1D5PGS8
Ensembl - ENSGALG00000031282
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ubr5ENSDARG00000018192Danio rerio
 UBR5ENSG00000104517Homo sapiens
 Ubr5ENSMUSG00000037487Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AREL1 / apoptosis resistant E3 ubiquitin protein ligase 1 / O15033* / Q8CHG5*ENSGALG000000102706


Protein motifs (from Interpro)
Interpro ID Name
 IPR000569  HECT domain
 IPR002004  Polyadenylate-binding protein/Hyperplastic disc protein
 IPR003126  Zinc finger, UBR-type
 IPR009091  Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
 IPR024725  E3 ubiquitin ligase EDD, ubiquitin-associated domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0033160 positive regulation of protein import into nucleus, translocation IEA
 biological_processGO:0050847 progesterone receptor signaling pathway IEA
 biological_processGO:0070936 protein K48-linked ubiquitination IEA
 biological_processGO:0090263 positive regulation of canonical Wnt signaling pathway IEA
 biological_processGO:1901315 negative regulation of histone H2A K63-linked ubiquitination IEA
 biological_processGO:2000780 negative regulation of double-strand break repair IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0034450 ubiquitin-ubiquitin ligase activity IEA
 molecular_functionGO:0043130 ubiquitin binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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