ENSGALG00000031519


Gallus gallus

Features
Gene ID: ENSGALG00000031519
  
Biological name :KHDRBS3
  
Synonyms : KHDRBS3 / KH RNA binding domain containing, signal transduction associated 3
  
Possible biological names infered from orthology : KH domain-containing, RNA-binding, signal transduction-associated protein 3 / O75525 / Q9R226
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 143191899
Gene end: 143269024
  
Corresponding Affymetrix probe sets: Gga.10570.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045149
Ensembl peptide - ENSGALP00000059539
Ensembl peptide - ENSGALP00000051650
Ensembl peptide - ENSGALP00000050275
NCBI entrez gene - 420317     See in Manteia.
RefSeq - XM_001231271
RefSeq - XM_004940056
RefSeq - XM_418427
swissprot - A0A1L1RL97
swissprot - A0A1D5NXQ0
swissprot - A0A1D5PFT3
swissprot - A0A1D5PBZ2
Ensembl - ENSGALG00000031519
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 O75525ENSG00000131773Homo sapiens
 Q9R226ENSMUSG00000022332Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KHDRBS2 / KH RNA binding domain containing, signal transduction associated 2 / Q5VWX1* / Q9WU01* / KH domain-containing, RNA-binding, signal transduction-associated protein 2 *ENSGALG0000001627659
KHDRBS1 / KH domain-containing, RNA-binding, signal transduction-associated protein 1 / Q07666* / Q60749* / KH RNA binding domain containing, signal transduction associated 1*ENSGALG0000000327252
QKI / Q9YH18 / Protein quaking / Qk* / Q9QYS9* / Q96PU8* / QKI, KH domain containing RNA binding*ENSGALG0000001155528


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR032335  Sam68, tyrosine-rich domain
 IPR032571  KHDRBS, Qua1 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048024 regulation of mRNA splicing, via spliceosome IEA
 biological_processGO:0051259 protein complex oligomerization IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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