ENSG00000131773


Homo sapiens

Features
Gene ID: ENSG00000131773
  
Biological name :KHDRBS3
  
Synonyms : KHDRBS3 / KH RNA binding domain containing, signal transduction associated 3 / O75525
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: q24.23
Gene start: 135457457
Gene end: 135656722
  
Corresponding Affymetrix probe sets: 209781_s_at (Human Genome U133 Plus 2.0 Array)   230249_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000427851
Ensembl peptide - ENSP00000431022
Ensembl peptide - ENSP00000430284
Ensembl peptide - ENSP00000428643
Ensembl peptide - ENSP00000428607
Ensembl peptide - ENSP00000348108
Ensembl peptide - ENSP00000427841
NCBI entrez gene - 10656     See in Manteia.
OMIM - 610421
RefSeq - XM_011516798
RefSeq - NM_006558
RefSeq - XM_005250757
RefSeq - XM_005250758
RefSeq - XM_011516796
RefSeq - XM_011516797
RefSeq Peptide - NP_006549
swissprot - O75525
swissprot - E5RG12
swissprot - E5RHD3
swissprot - H0YAQ1
swissprot - H0YAQ3
swissprot - E5RJZ9
swissprot - H0YB45
Ensembl - ENSG00000131773
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 KHDRBS3ENSGALG00000031519Gallus gallus
 Q9R226ENSMUSG00000022332Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5VWX1 / KHDRBS2 / KH RNA binding domain containing, signal transduction associated 2ENSG0000011223266
Q07666 / KHDRBS1 / KH RNA binding domain containing, signal transduction associated 1ENSG0000012177457
QKI / Q96PU8 / QKI, KH domain containing RNA bindingENSG0000011253131
SF1 / Q15637 / splicing factor 1ENSG0000016806626


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR032335  Sam68, tyrosine-rich domain
 IPR032571  KHDRBS, Qua1 domain
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0048024 regulation of mRNA splicing, via spliceosome IEA
 biological_processGO:0051259 protein complex oligomerization IDA
 cellular_componentGO:0005634 nucleus IMP
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017124 SH3 domain binding IEA
 molecular_functionGO:0019904 protein domain specific binding IPI
 molecular_functionGO:0042802 identical protein binding IDA


Pathways (from Reactome)
Pathway description
PTK6 Regulates Proteins Involved in RNA Processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000101213 PTK6 / Q13882 / protein tyrosine kinase 6  / reaction






 

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