ENSG00000112232


Homo sapiens

Features
Gene ID: ENSG00000112232
  
Biological name :KHDRBS2
  
Synonyms : KHDRBS2 / KH RNA binding domain containing, signal transduction associated 2 / Q5VWX1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q11.1
Gene start: 61679960
Gene end: 62286227
  
Corresponding Affymetrix probe sets: 215527_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000281156
NCBI entrez gene - 202559     See in Manteia.
OMIM - 610487
RefSeq - XM_017010347
RefSeq - NM_152688
RefSeq - XM_017010344
RefSeq - XM_017010345
RefSeq - XM_011535516
RefSeq - XM_017010336
RefSeq - XM_017010337
RefSeq - XM_017010340
RefSeq - XM_017010341
RefSeq - XM_017010342
RefSeq - XM_017010343
RefSeq Peptide - NP_689901
swissprot - Q5VWX1
Ensembl - ENSG00000112232
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q08BJ2ENSDARG00000069469Danio rerio
 KHDRBS2ENSGALG00000016276Gallus gallus
 Q9WU01ENSMUSG00000026058Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
O75525 / KHDRBS3 / KH RNA binding domain containing, signal transduction associated 3ENSG0000013177365
Q07666 / KHDRBS1 / KH RNA binding domain containing, signal transduction associated 1ENSG0000012177464
QKI / Q96PU8 / QKI, KH domain containing RNA bindingENSG0000011253130
SF1 / Q15637 / splicing factor 1ENSG0000016806626


Protein motifs (from Interpro)
Interpro ID Name
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR032335  Sam68, tyrosine-rich domain
 IPR032571  KHDRBS, Qua1 domain
 IPR036612  K Homology domain, type 1 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0048024 regulation of mRNA splicing, via spliceosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008143 poly(A) binding IEA
 molecular_functionGO:0008266 poly(U) RNA binding IEA
 molecular_functionGO:0017124 SH3 domain binding IEA
 molecular_functionGO:0042169 SH2 domain binding IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
PTK6 Regulates Proteins Involved in RNA Processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000101213 PTK6 / Q13882 / protein tyrosine kinase 6  / reaction






 

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