ENSGALG00000031812


Gallus gallus

Features
Gene ID: ENSGALG00000031812
  
Biological name :TDRKH
  
Synonyms : TDRKH / tudor and KH domain containing
  
Possible biological names infered from orthology : Mus musculus tudor and KH domain containing protein (Tdrkh), transcript variant 4, mRNA. / Q80VL1 / Q9Y2W6
  
Species: Gallus gallus
  
Chr. number: 25
Strand: -1
Band:
Gene start: 2863361
Gene end: 2867426
  
Corresponding Affymetrix probe sets: GgaAffx.11181.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044935
Ensembl peptide - ENSGALP00000048687
Ensembl peptide - ENSGALP00000047856
NCBI entrez gene - 425667     See in Manteia.
RefSeq - XM_015280019
swissprot - A0A1D5P7J6
swissprot - A0A1D5P589
swissprot - A0A1D5NX42
Ensembl - ENSGALG00000031812
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tdrkhENSDARG00000053474Danio rerio
 TDRKHENSG00000182134Homo sapiens
 TdrkhENSMUSG00000041912Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TDRD5 / tudor domain containing 5 / Q5VCS6* / Q8NAT2* / Tudor domain-containing protein 5 *ENSGALG0000003363412
TDRD1 / tudor domain containing 1 / Q99MV1* / Q9BXT4* / Tudor domain-containing protein 1 *ENSGALG0000004618010
TDRD15 / tudor domain containing 15 / B5MCY1*ENSGALG000000164929
TDRD6* / O60522* / tudor domain containing 6* / tudor domain-containing protein 6 isoform 3 *ENSGALG000000442799
RNF17* / Q99MV7* / Q9BXT8* / ring finger protein 17*ENSGALG000000454149


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007140 male meiotic nuclear division IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0009566 fertilization IEA
 biological_processGO:0034587 piRNA metabolic process IEA
 biological_processGO:0043046 DNA methylation involved in gamete generation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0071546 pi-body IEA
 cellular_componentGO:0071547 piP-body IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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