ENSGALG00000032577


Gallus gallus

Features
Gene ID: ENSGALG00000032577
  
Biological name :MECOM
  
Synonyms : MDS1 and EVI1 complex locus / MECOM
  
Possible biological names infered from orthology : P14404 / Q03112
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 20063010
Gene end: 20363223
  
Corresponding Affymetrix probe sets: Gga.10682.1.S1_at (Chicken Array)   Gga.8807.1.S1_at (Chicken Array)   GgaAffx.22926.1.S1_at (Chicken Array)   GgaAffx.5951.1.S1_at (Chicken Array)   GgaAffx.5951.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049251
Ensembl peptide - ENSGALP00000054583
NCBI entrez gene - 424997     See in Manteia.
RefSeq - XM_422804
RefSeq - XM_015291752
RefSeq - XM_015291753
RefSeq - XM_004943504
RefSeq - XM_015291749
RefSeq - XM_015291750
RefSeq - XM_015291751
swissprot - A0A1D5PNY7
swissprot - A0A1D5P950
Ensembl - ENSGALG00000032577
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mecomENSDARG00000060808Danio rerio
 MECOMENSG00000085276Homo sapiens
 MecomENSMUSG00000027684Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PRDM16 / PR/SET domain 16 / A2A935* / Q9HAZ2* / PR domain zinc finger protein 16 *ENSGALG0000003672849
PRDM13 / PR/SET domain 13 / E9PZZ1* / Q9H4Q3* / PR domain zinc finger protein 13 *ENSGALG000000384766


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR013087  Zinc finger C2H2-type
 IPR030413  Transcription factor hamlet


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0043069 negative regulation of programmed cell death IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0046329 negative regulation of JNK cascade IEA
 biological_processGO:0051726 regulation of cell cycle IEA
 cellular_componentGO:0000118 histone deacetylase complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
Regulation of PTEN gene transcription


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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