ENSG00000085276


Homo sapiens

Features
Gene ID: ENSG00000085276
  
Biological name :MECOM
  
Synonyms : MDS1 and EVI1 complex locus / MECOM / Q03112
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q26.2
Gene start: 169083499
Gene end: 169663618
  
Corresponding Affymetrix probe sets: 208434_at (Human Genome U133 Plus 2.0 Array)   215851_at (Human Genome U133 Plus 2.0 Array)   221884_at (Human Genome U133 Plus 2.0 Array)   226420_at (Human Genome U133 Plus 2.0 Array)   243277_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000418689
Ensembl peptide - ENSP00000418046
Ensembl peptide - ENSP00000418828
Ensembl peptide - ENSP00000486104
Ensembl peptide - ENSP00000420466
Ensembl peptide - ENSP00000420072
Ensembl peptide - ENSP00000420048
Ensembl peptide - ENSP00000419995
Ensembl peptide - ENSP00000419770
Ensembl peptide - ENSP00000419757
Ensembl peptide - ENSP00000419537
Ensembl peptide - ENSP00000264674
Ensembl peptide - ENSP00000394302
Ensembl peptide - ENSP00000417299
Ensembl peptide - ENSP00000417506
Ensembl peptide - ENSP00000417899
Ensembl peptide - ENSP00000417922
NCBI entrez gene - 2122     See in Manteia.
OMIM - 165215
RefSeq - XM_017005878
RefSeq - NM_001205194
RefSeq - NM_004991
RefSeq - NM_005241
RefSeq - XM_005247213
RefSeq - XM_005247214
RefSeq - XM_005247215
RefSeq - XM_005247219
RefSeq - XM_005247220
RefSeq - XM_005247221
RefSeq - XM_005247223
RefSeq - XM_005247224
RefSeq - XM_005247225
RefSeq - XM_005247226
RefSeq - XM_011512546
RefSeq - XM_017005874
RefSeq - XM_017005875
RefSeq - XM_017005876
RefSeq - XM_017005877
RefSeq - NM_001105077
RefSeq - NM_001105078
RefSeq - NM_001163999
RefSeq - NM_001164000
RefSeq Peptide - NP_001098548
RefSeq Peptide - NP_001157471
RefSeq Peptide - NP_001157472
RefSeq Peptide - NP_001192123
RefSeq Peptide - NP_004982
RefSeq Peptide - NP_005232
RefSeq Peptide - NP_001098547
swissprot - A0A1B0GXI8
swissprot - H9KVD4
swissprot - A0A0C3SFZ7
swissprot - E9PGE9
swissprot - Q03112
swissprot - E7EUL6
swissprot - E7EU48
swissprot - E7ERX0
swissprot - E7EQ57
swissprot - E7EPY2
swissprot - C9JU02
Ensembl - ENSG00000085276
  
Related genetic diseases (OMIM): 616738 - Radioulnar synostosis with amegakaryocytic thrombocytopenia 2, 616738

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mecomENSDARG00000060808Danio rerio
 MECOMENSGALG00000032577Gallus gallus
 MecomENSMUSG00000027684Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PRDM16 / Q9HAZ2 / PR/SET domain 16ENSG0000014261153
Q96EG3 / ZNF837 / zinc finger protein 837ENSG0000015247510
PRDM13 / Q9H4Q3 / PR/SET domain 13ENSG0000011223810


Protein motifs (from Interpro)
Interpro ID Name
 IPR001214  SET domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily
 IPR036970  Mds1 and Evi1 complex locus protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0034968 histone lysine methylation IEA
 biological_processGO:0043069 negative regulation of programmed cell death IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IDA
 biological_processGO:0046329 negative regulation of JNK cascade IMP
 biological_processGO:0051726 regulation of cell cycle IDA
 biological_processGO:0071425 hematopoietic stem cell proliferation ISS
 cellular_componentGO:0000118 histone deacetylase complex IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding ISS
 molecular_functionGO:0003700 DNA-binding transcription factor activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0018024 histone-lysine N-methyltransferase activity TAS
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
PKMTs methylate histone lysines
Regulation of PTEN gene transcription


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000034 Hydrocele 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0001385 Hip dysplasia 
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 HP:0001873 Thrombocytopenia 
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 HP:0001875 Neutropenia 
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 HP:0001903 Anemia 
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 HP:0001905 Congenital thrombocytopenia 
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 HP:0002974 Radioulnar synostosis "An abnormal osseous union (fusion) between the radius and the ulna." [HPO:curators]
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 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
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 HP:0004859 amegakaryocytic thrombocytopenia 
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 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0006394 Limited pronation/supination of forearm "A limitation of the ability to place the forearm in a position such that the palm faces anteriorly (supination) and to place the forearm in a position such that the palm faces posteriorly (pronation)." [HPO:curators]
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 HP:0010557 Overlapping fingers "Overlapping of the fingers occuring as the result of a deviation of the fingers from their normal position." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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