ENSGALG00000032930


Gallus gallus

Features
Gene ID: ENSGALG00000032930
  
Biological name :NCL
  
Synonyms : NCL / nucleolin
  
Possible biological names infered from orthology : P09405 / P19338
  
Species: Gallus gallus
  
Chr. number: 9
Strand: -1
Band:
Gene start: 15322922
Gene end: 15330360
  
Corresponding Affymetrix probe sets: Gga.3663.1.S1_a_at (Chicken Array)   Gga.3663.2.S1_at (Chicken Array)   Gga.3663.3.A1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045642
NCBI entrez gene - 396201     See in Manteia.
RefSeq - NM_205265
RefSeq Peptide - NP_990596
swissprot - A0A1D5NZ30
Ensembl - ENSGALG00000032930
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nclENSDARG00000002710Danio rerio
 NCLENSG00000115053Homo sapiens
 NclENSMUSG00000026234Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR003954  RNA recognition motif domain, eukaryote
 IPR011989  Armadillo-like helical
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0017148 negative regulation of translation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0071364 cellular response to epidermal growth factor stimulus IEA
 biological_processGO:1901838 positive regulation of transcription of nucleolar large rRNA by RNA polymerase I IEA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005938 cell cortex IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0042162 telomeric DNA binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0044547 DNA topoisomerase binding IEA
 molecular_functionGO:0048027 mRNA 5"-UTR binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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