ENSGALG00000033205


Gallus gallus

Features
Gene ID: ENSGALG00000033205
  
Biological name :PHF20L1
  
Synonyms : PHD finger protein 20 like 1 / PHF20L1
  
Possible biological names infered from orthology : A8MW92 / PHD finger protein 20-like protein 1 / Q8CCJ9
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 141806556
Gene end: 141854403
  
Corresponding Affymetrix probe sets: Gga.10056.1.S1_at (Chicken Array)   Gga.5174.1.S1_at (Chicken Array)   GgaAffx.10378.1.S1_at (Chicken Array)   GgaAffx.21493.1.S1_s_at (Chicken Array)   GgaAffx.24911.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049123
Ensembl peptide - ENSGALP00000050168
NCBI entrez gene - 420323     See in Manteia.
RefSeq - XM_015283087
RefSeq - XM_015283084
RefSeq - XM_015283085
RefSeq - XM_015283086
RefSeq - NM_001039279
RefSeq Peptide - NP_001034368
swissprot - A0A1D5PBN8
swissprot - A0A1D5P8S4
Ensembl - ENSGALG00000033205
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 phf20l1ENSDARG00000017427Danio rerio
 A8MW92ENSG00000129292Homo sapiens
 Q8CCJ9ENSMUSG00000072501Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PHF20 / PHD finger protein 20 / Q8BLG0* / Q9BVI0*ENSGALG0000000152230


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR004092  Mbt repeat
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR014002  Agenet domain, plant type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR022255  Domain of unknown function DUF3776


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr