ENSMUSG00000072501


Mus musculus

Features
Gene ID: ENSMUSG00000072501
  
Biological name :Phf20l1
  
Synonyms : PHD finger protein 20-like protein 1 / Phf20l1 / Q8CCJ9
  
Possible biological names infered from orthology : A8MW92 / PHD finger protein 20 like 1
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: D2
Gene start: 66577560
Gene end: 66647976
  
Corresponding Affymetrix probe sets: 10424467 (MoGene1.0st)   10424485 (MoGene1.0st)   1418960_at (Mouse Genome 430 2.0 Array)   1437563_at (Mouse Genome 430 2.0 Array)   1439236_at (Mouse Genome 430 2.0 Array)   1454939_at (Mouse Genome 430 2.0 Array)   1456871_a_at (Mouse Genome 430 2.0 Array)   1457264_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000155487
Ensembl peptide - ENSMUSP00000155538
Ensembl peptide - ENSMUSP00000155575
Ensembl peptide - ENSMUSP00000155465
Ensembl peptide - ENSMUSP00000035682
NCBI entrez gene - 239510     See in Manteia.
MGI - MGI:2444412
RefSeq - XM_017316601
RefSeq - NM_001081409
RefSeq - XM_006520921
RefSeq - XM_006520926
RefSeq - XM_006520916
RefSeq - XM_006520917
RefSeq - XM_006520918
RefSeq - XM_006520919
RefSeq - XM_006520920
RefSeq Peptide - NP_001074878
swissprot - Q8CCJ9
Ensembl - ENSMUSG00000072501
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 phf20l1ENSDARG00000017427Danio rerio
 PHF20L1ENSGALG00000033205Gallus gallus
 A8MW92ENSG00000129292Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Phf20 / Q8BLG0 / PHD finger protein 20 / Q9BVI0*ENSMUSG0000003811632


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR004092  Mbt repeat
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR014002  Agenet domain, plant type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR022255  Domain of unknown function DUF3776


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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