ENSG00000129292


Homo sapiens

Features
Gene ID: ENSG00000129292
  
Biological name :PHF20L1
  
Synonyms : A8MW92 / PHD finger protein 20 like 1 / PHF20L1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: q24.22
Gene start: 132775358
Gene end: 132848807
  
Corresponding Affymetrix probe sets: 1554472_a_at (Human Genome U133 Plus 2.0 Array)   219606_at (Human Genome U133 Plus 2.0 Array)   222133_s_at (Human Genome U133 Plus 2.0 Array)   226942_at (Human Genome U133 Plus 2.0 Array)   227523_s_at (Human Genome U133 Plus 2.0 Array)   230098_at (Human Genome U133 Plus 2.0 Array)   231967_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000378784
Ensembl peptide - ENSP00000378788
Ensembl peptide - ENSP00000487068
Ensembl peptide - ENSP00000482945
Ensembl peptide - ENSP00000433524
Ensembl peptide - ENSP00000433125
Ensembl peptide - ENSP00000430688
Ensembl peptide - ENSP00000428091
Ensembl peptide - ENSP00000220847
Ensembl peptide - ENSP00000338269
Ensembl peptide - ENSP00000378775
Ensembl peptide - ENSP00000378777
NCBI entrez gene - 51105     See in Manteia.
RefSeq - XM_017013517
RefSeq - XM_011517078
RefSeq - XM_011517079
RefSeq - XM_011517080
RefSeq - XM_011517081
RefSeq - XM_011517088
RefSeq - XM_017013509
RefSeq - XM_017013510
RefSeq - XM_017013511
RefSeq - XM_017013512
RefSeq - XM_017013513
RefSeq - XM_017013514
RefSeq - XM_017013515
RefSeq - XM_017013516
RefSeq - NM_001277196
RefSeq - NM_016018
RefSeq - NM_198513
RefSeq - XM_005250931
RefSeq - XM_011517075
RefSeq - XM_011517076
RefSeq - XM_011517077
RefSeq Peptide - NP_940915
RefSeq Peptide - NP_057102
RefSeq Peptide - NP_001264125
swissprot - A8MW92
swissprot - A8MUE8
swissprot - A0A0D9SG14
swissprot - E9PM57
swissprot - H0YC05
swissprot - H0YDF7
swissprot - A0A0A0MQS0
swissprot - F8W9L8
swissprot - E5RK91
swissprot - A8MXR8
Ensembl - ENSG00000129292
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 phf20l1ENSDARG00000017427Danio rerio
 PHF20L1ENSGALG00000033205Gallus gallus
 Q8CCJ9ENSMUSG00000072501Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PHF20 / Q9BVI0 / PHD finger protein 20ENSG0000002529333


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR004092  Mbt repeat
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR014002  Agenet domain, plant type
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR022255  Domain of unknown function DUF3776


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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