ENSGALG00000033770


Gallus gallus

Features
Gene ID: ENSGALG00000033770
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : P15884 / Q60722 / TCF4 / transcription factor 4
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 2869
Gene end: 138270
  
Corresponding Affymetrix probe sets: Gga.13185.1.S1_at (Chicken Array)   GgaAffx.11174.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053898
NCBI entrez gene - 768612     See in Manteia.
RefSeq - XM_015277380
RefSeq - XM_015277383
RefSeq - XM_015277381
RefSeq - XM_015277382
swissprot - A0A1D5PM25
Ensembl - ENSGALG00000033770
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01086139.1ENSDARG00000113371Danio rerio
 TCF4ENSDARG00000107408Danio rerio
 TCF4ENSG00000196628Homo sapiens
 Tcf4ENSMUSG00000053477Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TCF12 / transcription factor 12 / Q61286* / Q99081*ENSGALG0000000430455
TCF3 / transcription factor 3 / P15806* / P15923* / Transcription factor E2-alpha *ENSGALG0000000109348


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter IEA
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0016525 negative regulation of angiogenesis IEA
 biological_processGO:0042118 endothelial cell activation IEA
 biological_processGO:0045666 positive regulation of neuron differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0065004 protein-DNA complex assembly IEA
 biological_processGO:1900746 regulation of vascular endothelial growth factor signaling pathway IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001011 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001087 obsolete transcription factor activity, TFIIB-class binding IEA
 molecular_functionGO:0001093 TFIIB-class transcription factor binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0043621 protein self-association IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0070888 E-box binding IEA


Pathways (from Reactome)
Pathway description
CDO in myogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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