ENSGALG00000034213


Gallus gallus

Features
Gene ID: ENSGALG00000034213
  
Biological name :TNFRSF1B
  
Synonyms : TNFRSF1B / tumor necrosis factor receptor superfamily member 1B precursor
  
Possible biological names infered from orthology : P20333 / P25119 / TNF receptor superfamily member 1B / tumor necrosis factor receptor superfamily, member 1b
  
Species: Gallus gallus
  
Chr. number: 21
Strand: -1
Band:
Gene start: 5452530
Gene end: 5465736
  
Corresponding Affymetrix probe sets: Gga.5148.1.S1_at (Chicken Array)   Gga.5148.1.S1_s_at (Chicken Array)   Gga.5148.1.S2_s_at (Chicken Array)   GgaAffx.12029.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056343
Ensembl peptide - ENSGALP00000057018
NCBI entrez gene - 395083     See in Manteia.
RefSeq - NM_204439
RefSeq - XM_015296812
RefSeq Peptide - NP_989770
swissprot - A0A1D5PVP3
swissprot - A0A1D5PTU3
Ensembl - ENSGALG00000034213
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnfrsf1bENSDARG00000070165Danio rerio
 P20333ENSG00000028137Homo sapiens
 P25119ENSMUSG00000028599Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TNFRSF21 / tumor necrosis factor receptor superfamily member 21 precursor / O75509* / Q9EPU5* / TNF receptor superfamily member 21* / Tumor necrosis factor receptor superfamily member 21 *ENSGALG0000001671921
TNFRSF11B / tumor necrosis factor receptor superfamily member 11B precursor / O00300* / O08712* / TNF receptor superfamily member 11b* / tumor necrosis factor receptor superfamily, member ...ENSGALG0000004316716
TNFRSF6B / TNF receptor superfamily member 6b / O95407*ENSGALG0000000610614
TNFRSF11A / TNF receptor superfamily member 11a / O35305* / Q9Y6Q6* / Tumor necrosis factor receptor superfamily member 11A *ENSGALG0000004564214
CD40 / tumor necrosis factor receptor superfamily member 5 precursor / P25942* / P27512* / CD40 molecule* / Tumor necrosis factor receptor superfamily member 5 *ENSGALG0000000701512


Protein motifs (from Interpro)
Interpro ID Name
 IPR001368  TNFR/NGFR cysteine-rich region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006954 inflammatory response IEA
 biological_processGO:0033209 tumor necrosis factor-mediated signaling pathway IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005031 tumor necrosis factor-activated receptor activity IEA


Pathways (from Reactome)
Pathway description
TNFR2 non-canonical NF-kB pathway
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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