ENSGALG00000034456


Gallus gallus

Features
Gene ID: ENSGALG00000034456
  
Biological name :PRELP
  
Synonyms : PRELP / proline and arginine rich end leucine rich repeat protein
  
Possible biological names infered from orthology : P51888 / proline arginine-rich end leucine-rich repeat / Q9JK53
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 5170534
Gene end: 5172975
  
Corresponding Affymetrix probe sets: Gga.5933.1.S1_at (Chicken Array)   GgaAffx.2205.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049793
NCBI entrez gene - 419933     See in Manteia.
RefSeq - XM_418054
swissprot - A0A1D5PAN0
Ensembl - ENSGALG00000034456
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 prelpENSDARG00000070597Danio rerio
 PRELPENSG00000188783Homo sapiens
 PrelpENSMUSG00000041577Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KERA / O42235 / Keratocan / O35367* / O60938*ENSGALG0000001127047
FMOD / fibromodulin precursor / P50608* / Q06828* / fibromodulin*ENSGALG0000003406738
OMD / osteomodulin / O35103* / Q99983*ENSGALG0000002608036
LUM / P51890 / Lumican / P51884* / P51885*ENSGALG0000001127134
DCN / decorin precursor / P07585* / P28654* / decorin*ENSGALG0000001127427
ECM2 / extracellular matrix protein 2 / O94769* / Q5FW85*ENSGALG0000000469526
ASPN / asporin / Q99MQ4* / Q9BXN1*ENSGALG0000000472226
PODN / podocan / Q7TQ62* / Q7Z5L7*ENSGALG0000002186926


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR027216  Prolargin
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007569 cell aging IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0005201 extracellular matrix structural constituent IEA


Pathways (from Reactome)
Pathway description
Keratan sulfate biosynthesis
Keratan sulfate degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr