ENSGALG00000035075


Gallus gallus

Features
Gene ID: ENSGALG00000035075
  
Biological name :TAP1
  
Synonyms : antigen peptide transporter 1 / TAP1
  
Possible biological names infered from orthology : P21958 / Q03518 / transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) / transporter 1, ATP binding cassette subfamily B member
  
Species: Gallus gallus
  
Chr. number: 16
Strand: 1
Band:
Gene start: 81925
Gene end: 86753
  
Corresponding Affymetrix probe sets: Gga.14717.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045699
Ensembl peptide - ENSGALP00000048495
NCBI entrez gene - 427727     See in Manteia.
RefSeq - NM_001135968
RefSeq - XM_015294989
RefSeq Peptide - NP_001129440
swissprot - A0A1D5P712
swissprot - A0A1D5NZ84
Ensembl - ENSGALG00000035075
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tap1ENSDARG00000079766Danio rerio
 TAP1ENSG00000168394Homo sapiens
 Tap1ENSMUSG00000037321Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCB9 / ATP binding cassette subfamily B member 9 / Q9JJ59* / Q9NP78* / ATP-binding cassette, sub-family B (MDR/TAP), member 9*ENSGALG0000000373636
TAP2 / Q03519* / P36371* / AL669918.1* / transporter 2, ATP binding cassette subfamily B member* / transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)*ENSGALG0000002938136
ABCB10 / ATP binding cassette subfamily B member 10 / Q9JI39* / Q9NRK6* / ATP-binding cassette, sub-family B (MDR/TAP), member 10*ENSGALG0000001109627


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR013306  Antigen peptide transporter 1
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006952 defense response IEA
 biological_processGO:0015833 peptide transport IEA
 biological_processGO:0019885 antigen processing and presentation of endogenous peptide antigen via MHC class I IEA
 biological_processGO:0042886 amide transport IEA
 biological_processGO:0046967 cytosol to ER transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IEA
 cellular_componentGO:0042825 TAP complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0015440 peptide-transporting ATPase activity IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0023029 MHC class Ib protein binding IEA
 molecular_functionGO:0042287 MHC protein binding IEA
 molecular_functionGO:0042288 MHC class I protein binding IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA
 molecular_functionGO:0043531 ADP binding IEA
 molecular_functionGO:0046979 TAP2 binding IEA


Pathways (from Reactome)
Pathway description
ER-Phagosome pathway
Antigen Presentation: Folding, assembly and peptide loading of class I MHC


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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