ENSGALG00000036378


Gallus gallus

Features
Gene ID: ENSGALG00000036378
  
Biological name :TBR1
  
Synonyms : T-box, brain 1 / TBR1
  
Possible biological names infered from orthology : Q16650 / Q64336 / T-box brain protein 1
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 21480823
Gene end: 21487030
  
Corresponding Affymetrix probe sets: GgaAffx.7060.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048357
NCBI entrez gene - 429029     See in Manteia.
RefSeq - XM_015289715
swissprot - A0A1D5P6N0
Ensembl - ENSGALG00000036378
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbr1bENSDARG00000004712Danio rerio
 TBR1ENSG00000136535Homo sapiens
 Tbr1ENSMUSG00000035033Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
EOMES / Gallus gallus eomesodermin (EOMES), mRNA. / O95936* / O54839* / eomesodermin* / Eomesodermin homolog *ENSGALG0000002724750
MGA* / A2AWL7* / Q8IWI9* / MAX-associated protein * / MGA, MAX dimerization protein*ENSGALG0000003145619
T / brachyury protein / TBXT* / P20293* / O15178* / T-box transcription factor T* / brachyury, T-box transcription factor T*ENSGALG0000001148918
TBX19 / T-box-containing protein TBXT / O60806* / Q99ME7* / T-box 19* / T-box transcription factor TBX19 *ENSGALG0000001524417
ENSGALG000000371733
MGA* / A2AWL7* / Q8IWI9* / MAX-associated protein * / MGA, MAX dimerization protein*ENSGALG000000086532


Protein motifs (from Interpro)
Interpro ID Name
 IPR001699  Transcription factor, T-box
 IPR008967  p53-like transcription factor, DNA-binding
 IPR018186  Transcription factor, T-box, conserved site
 IPR032385  T-box transcription factor-associated


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001661 conditioned taste aversion IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0010092 specification of animal organ identity IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0010975 regulation of neuron projection development IEA
 biological_processGO:0021764 amygdala development IEA
 biological_processGO:0021902 commitment of neuronal cell to specific neuron type in forebrain IEA
 biological_processGO:0030182 neuron differentiation IEA
 biological_processGO:0030902 hindbrain development IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:1902667 regulation of axon guidance IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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