ENSGALG00000027247


Gallus gallus

Features
Gene ID: ENSGALG00000027247
  
Biological name :EOMES
  
Synonyms : EOMES / Gallus gallus eomesodermin (EOMES), mRNA.
  
Possible biological names infered from orthology : eomesodermin / Eomesodermin homolog / O54839 / O95936
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 38739416
Gene end: 38744142
  
Corresponding Affymetrix probe sets: GgaAffx.7253.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041400
NCBI entrez gene - 428443     See in Manteia.
RefSeq - XM_004939419
RefSeq - NM_001321555
RefSeq - XM_426003
RefSeq Peptide - NP_001308484
swissprot - R4GH67
Ensembl - ENSGALG00000027247
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 eomesaENSDARG00000006640Danio rerio
 eomesbENSDARG00000104243Danio rerio
 EOMESENSG00000163508Homo sapiens
 EomesENSMUSG00000032446Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBR1 / T-box, brain 1 / Q16650* / Q64336* / T-box brain protein 1 *ENSGALG0000003637851
MGA* / A2AWL7* / Q8IWI9* / MAX-associated protein * / MGA, MAX dimerization protein*ENSGALG0000003145620
T / brachyury protein / TBXT* / P20293* / O15178* / T-box transcription factor T* / brachyury, T-box transcription factor T*ENSGALG0000001148918
TBX19 / T-box-containing protein TBXT / O60806* / Q99ME7* / T-box 19* / T-box transcription factor TBX19 *ENSGALG0000001524417
ENSGALG000000371734
MGA* / A2AWL7* / Q8IWI9* / MAX-associated protein * / MGA, MAX dimerization protein*ENSGALG000000086531


Protein motifs (from Interpro)
Interpro ID Name
 IPR001699  Transcription factor, T-box
 IPR008967  p53-like transcription factor, DNA-binding
 IPR018186  Transcription factor, T-box, conserved site
 IPR032385  T-box transcription factor-associated


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001706 endoderm formation IEA
 biological_processGO:0001707 mesoderm formation IEA
 biological_processGO:0001714 endodermal cell fate specification IEA
 biological_processGO:0001824 blastocyst development IEA
 biological_processGO:0001829 trophectodermal cell differentiation IEA
 biological_processGO:0002302 CD8-positive, alpha-beta T cell differentiation involved in immune response IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0010002 cardioblast differentiation IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0019827 stem cell population maintenance IEA
 biological_processGO:0021772 olfactory bulb development IEA
 biological_processGO:0021796 cerebral cortex regionalization IEA
 biological_processGO:0021895 cerebral cortex neuron differentiation IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0032609 interferon-gamma production IEA
 biological_processGO:0035914 skeletal muscle cell differentiation IEA
 biological_processGO:0045597 positive regulation of cell differentiation IEA
 biological_processGO:0045664 regulation of neuron differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0050767 regulation of neurogenesis IEA
 biological_processGO:0060706 cell differentiation involved in embryonic placenta development IEA
 biological_processGO:0060809 mesodermal to mesenchymal transition involved in gastrulation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001102 RNA polymerase II activating transcription factor binding IEA
 molecular_functionGO:0001191 transcriptional repressor activity, RNA polymerase II transcription factor binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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