ENSGALG00000011489


Gallus gallus

Features
Gene ID: ENSGALG00000011489
  
Biological name :T
  
Synonyms : brachyury protein / T
  
Possible biological names infered from orthology : brachyury, T-box transcription factor T / O15178 / P20293 / T-box transcription factor T / TBXT
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 43074402
Gene end: 43082303
  
Corresponding Affymetrix probe sets: Gga.3772.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000018703
Ensembl peptide - ENSGALP00000058778
NCBI entrez gene - 395782     See in Manteia.
RefSeq - XM_015284045
RefSeq - NM_204940
RefSeq Peptide - NP_990271
swissprot - F1NZI2
Ensembl - ENSGALG00000011489
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbxtbENSDARG00000039806Danio rerio
 TBXTENSG00000164458Homo sapiens
 TENSMUSG00000062327Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBX19 / T-box-containing protein TBXT / O60806* / Q99ME7* / T-box 19* / T-box transcription factor TBX19 *ENSGALG0000001524456
TBR1 / T-box, brain 1 / Q16650* / Q64336* / T-box brain protein 1 *ENSGALG0000003637828
EOMES / Gallus gallus eomesodermin (EOMES), mRNA. / O95936* / O54839* / eomesodermin* / Eomesodermin homolog *ENSGALG0000002724727
MGA* / A2AWL7* / Q8IWI9* / MAX-associated protein * / MGA, MAX dimerization protein*ENSGALG0000003145626
ENSGALG000000371735
MGA* / A2AWL7* / Q8IWI9* / MAX-associated protein * / MGA, MAX dimerization protein*ENSGALG000000086534


Protein motifs (from Interpro)
Interpro ID Name
 IPR001699  Transcription factor, T-box
 IPR002070  Transcription factor, Brachyury
 IPR008967  p53-like transcription factor, DNA-binding
 IPR018186  Transcription factor, T-box, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001570 vasculogenesis IEA
 biological_processGO:0001756 somitogenesis IEA
 biological_processGO:0001839 neural plate morphogenesis IEA
 biological_processGO:0001843 neural tube closure IEA
 biological_processGO:0003007 heart morphogenesis IEA
 biological_processGO:0003257 positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007341 penetration of zona pellucida IEA
 biological_processGO:0007498 mesoderm development IEA
 biological_processGO:0007509 mesoderm migration involved in gastrulation IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0009653 anatomical structure morphogenesis IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0014028 notochord formation IEA
 biological_processGO:0022414 reproductive process IEA
 biological_processGO:0023019 signal transduction involved in regulation of gene expression IEA
 biological_processGO:0030509 BMP signaling pathway IEA
 biological_processGO:0030903 notochord development IEA
 biological_processGO:0036342 post-anal tail morphogenesis IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048706 embryonic skeletal system development IEA
 biological_processGO:0060070 canonical Wnt signaling pathway IEA
 biological_processGO:0060349 bone morphogenesis IEA
 biological_processGO:0060395 SMAD protein signal transduction IEA
 biological_processGO:0061371 determination of heart left/right asymmetry IEA
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0000790 nuclear chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IEA
 molecular_functionGO:0001085 RNA polymerase II transcription factor binding IEA
 molecular_functionGO:0001102 RNA polymerase II activating transcription factor binding IEA
 molecular_functionGO:0001191 transcriptional repressor activity, RNA polymerase II transcription factor binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003705 transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0051087 chaperone binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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