ENSGALG00000036539


Gallus gallus

Features
Gene ID: ENSGALG00000036539
  
Biological name :EFNB1
  
Synonyms : EFNB1 / ephrin-B1 precursor
  
Possible biological names infered from orthology : ephrin B1 / P52795 / P98172
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 1039004
Gene end: 1084494
  
Corresponding Affymetrix probe sets: Gga.2142.1.S1_at (Chicken Array)   GgaAffx.26232.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049528
NCBI entrez gene - 395896     See in Manteia.
RefSeq - NM_205035
RefSeq - XM_015278194
RefSeq - XM_015278195
RefSeq Peptide - NP_990366
swissprot - A0A1D5P9X0
Ensembl - ENSGALG00000036539
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 efnb1ENSDARG00000007723Danio rerio
 EFNB1ENSG00000090776Homo sapiens
 Efnb1ENSMUSG00000031217Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
EFNB2 / ephrin B2 / P52799* / P52800*ENSGALG0000002917551


Protein motifs (from Interpro)
Interpro ID Name
 IPR001799  Ephrin receptor-binding domain
 IPR008972  Cupredoxin
 IPR019765  Ephrin, conserved site
 IPR031328  Ephrin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001755 neural crest cell migration IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0009880 embryonic pattern specification IEA
 biological_processGO:0031295 T cell costimulation IEA
 biological_processGO:0042102 positive regulation of T cell proliferation IEA
 biological_processGO:0048013 ephrin receptor signaling pathway IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045121 membrane raft IEA
 molecular_functionGO:0046875 ephrin receptor binding IEA


Pathways (from Reactome)
Pathway description
EPH-Ephrin signaling
EPHB-mediated forward signaling
Ephrin signaling
EPH-ephrin mediated repulsion of cells


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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