ENSGALG00000037339


Gallus gallus

Features
Gene ID: ENSGALG00000037339
  
Biological name :SMARCAD1
  
Synonyms : SMARCAD1 / SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
  
Possible biological names infered from orthology : Q04692 / Q9H4L7
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 37406077
Gene end: 37446916
  
Corresponding Affymetrix probe sets: GgaAffx.23225.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052346
NCBI entrez gene - 422522     See in Manteia.
RefSeq - XM_015276596
RefSeq - XM_015276599
RefSeq - XM_015276597
RefSeq - XM_015276598
swissprot - A0A1D5PHR6
Ensembl - ENSGALG00000037339
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 B0R061ENSDARG00000014041Danio rerio
 E7F1C4ENSDARG00000073721Danio rerio
 Q9H4L7ENSG00000163104Homo sapiens
 Q04692ENSMUSG00000029920Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR001650  Helicase, C-terminal
 IPR003892  Ubiquitin system component Cue
 IPR009060  UBA-like superfamily
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000018 regulation of DNA recombination IEA
 biological_processGO:0000729 DNA double-strand break processing IEA
 biological_processGO:0043044 ATP-dependent chromatin remodeling IEA
 biological_processGO:0051304 chromosome separation IEA
 biological_processGO:0070932 histone H3 deacetylation IEA
 biological_processGO:0070933 histone H4 deacetylation IEA
 cellular_componentGO:0000792 heterochromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0035861 site of double-strand break IEA
 cellular_componentGO:0043596 nuclear replication fork IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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