ENSGALG00000037619


Gallus gallus

Features
Gene ID: ENSGALG00000037619
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : homeobox A6 / homeobox B6 / Homeobox protein Hox-A6 / Homeobox protein Hox-B6 / HOXA6 / HOXB6 / P09023 / P09092 / P17509 / P31267
  
Species: Gallus gallus
  
Chr. number: 27
Strand: 1
Band:
Gene start: 3813038
Gene end: 3814998
  
Corresponding Affymetrix probe sets: Gga.7439.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058472
NCBI entrez gene - 777548     See in Manteia.
RefSeq - XM_015299441
swissprot - A0A1D5PZQ6
Ensembl - ENSGALG00000037619
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HOXA6ENSG00000106006Homo sapiens
 HOXB6ENSG00000108511Homo sapiens
 Hoxa6ENSMUSG00000043219Mus musculus
 Hoxb6ENSMUSG00000000690Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXA6 / Q5YLH5 / Homeobox protein Hox-A6 ENSGALG0000002890858
HOXA7 / Q90VZ9 / Homeobox protein Hox-A7 / P02830* / P31268* / homeobox A7*ENSGALG0000002698944
HOXB7 / homeobox B7 / P09024* / P09629* / Homeobox protein Hox-B7 *ENSGALG0000003274043
HOXC6 / homeobox C6 / P09630* / P10629* / Homeobox protein Hox-C6 *ENSGALG0000003905140
HOXB5ENSGALG0000003490740
HOXA5 / Q6B3N0 / Homeobox protein Hox-A5 / P09021* / P20719* / homeobox A5*ENSGALG0000002592938
HOXB8 / homeobox B8 / P09632* / P17481* / Homeobox protein Hox-B8 *ENSGALG0000004032036
HOXD4 / homeobox D4 / P09016* / P10628* / Homeobox protein Hox-D4 *ENSGALG0000002341935
HOXC5* / Q00444* / P32043* / AC012531.3* / homeobox C5* / Homeobox protein Hox-C5 *ENSGALG0000003041634
HOXC8 / Q9YH13 / Homeobox protein Hox-C8 / P09025* / P31273* / homeobox C8*ENSGALG0000003726234
HOXA4 / P17277 / Homeobox protein Hox-A4 / Q00056* / homeobox A4*ENSGALG0000002262234
HOXB4 / P14840 / Homeobox protein Hox-B4 / P10284* / P17483* / homeobox B4*ENSGALG0000000028433
HOXC4 / homeobox C4 / P09017* / Q08624*ENSGALG0000003553932
HOXD8 / P23459 / Homeobox protein Hox-D8 / P13378* / P23463* / homeobox D8*ENSGALG0000003727232
CDX1 / Q9DEB6 / Homeobox protein CDX-1 / P18111* / P47902* / caudal type homeobox 1*ENSGALG0000000567925
CDX2 / homeobox protein CDX-2 / P43241* / Q99626* / caudal type homeobox 2*ENSGALG0000003498323
CDX4 / O14627* / Q07424* / caudal type homeobox 4* / Homeobox protein CDX-4 *ENSGALG0000000765723
CDX4* / O14627* / Q07424* / caudal type homeobox 4* / Homeobox protein CDX-4 *ENSGALG0000000765623


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR001827  Homeobox protein, antennapedia type, conserved site
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR017995  Homeobox protein, antennapedia type
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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