ENSGALG00000025929


Gallus gallus

Features
Gene ID: ENSGALG00000025929
  
Biological name :HOXA5
  
Synonyms : Homeobox protein Hox-A5 / HOXA5 / Q6B3N0
  
Possible biological names infered from orthology : homeobox A5 / P09021 / P20719
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 32666651
Gene end: 32682336
  
Corresponding Affymetrix probe sets: Gga.11995.1.A1_at (Chicken Array)   Gga.11995.1.S1_s_at (Chicken Array)   Gga.16981.1.S1_at (Chicken Array)   GgaAffx.20083.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043005
Ensembl peptide - ENSGALP00000064050
NCBI entrez gene - 100858404     See in Manteia.
RefSeq - XM_003640699
RefSeq - XM_015281828
RefSeq Peptide - NP_001305348
swissprot - Q6B3N0
Ensembl - ENSGALG00000025929
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hoxa5aENSDARG00000102501Danio rerio
 HOXA5ENSG00000106004Homo sapiens
 Hoxa5ENSMUSG00000038253Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXB5ENSGALG0000003490754
HOXC5* / Q00444* / P32043* / AC012531.3* / homeobox C5* / Homeobox protein Hox-C5 *ENSGALG0000003041634
HOXD4 / homeobox D4 / P09016* / P10628* / Homeobox protein Hox-D4 *ENSGALG0000002341933
HOXC4 / homeobox C4 / P09017* / Q08624*ENSGALG0000003553932
HOXA4 / P17277 / Homeobox protein Hox-A4 / Q00056* / homeobox A4*ENSGALG0000002262231
HOXA6* / HOXB6* / P09023* / P09092* / P17509* / P31267* / homeobox B6* / homeobox A6* / Homeobox protein Hox-B6 * / Homeobox protein Hox-A6 *ENSGALG0000003761931
HOXA7 / Q90VZ9 / Homeobox protein Hox-A7 / P02830* / P31268* / homeobox A7*ENSGALG0000002698931
HOXB4 / P14840 / Homeobox protein Hox-B4 / P10284* / P17483* / homeobox B4*ENSGALG0000000028431
HOXA6 / Q5YLH5 / Homeobox protein Hox-A6 ENSGALG0000002890830
HOXB7 / homeobox B7 / P09024* / P09629* / Homeobox protein Hox-B7 *ENSGALG0000003274029
HOXC6 / homeobox C6 / P09630* / P10629* / Homeobox protein Hox-C6 *ENSGALG0000003905129
HOXB8 / homeobox B8 / P09632* / P17481* / Homeobox protein Hox-B8 *ENSGALG0000004032027
HOXC8 / Q9YH13 / Homeobox protein Hox-C8 / P09025* / P31273* / homeobox C8*ENSGALG0000003726227
HOXD8 / P23459 / Homeobox protein Hox-D8 / P13378* / P23463* / homeobox D8*ENSGALG0000003727223
CDX2 / homeobox protein CDX-2 / P43241* / Q99626* / caudal type homeobox 2*ENSGALG0000003498322
CDX4* / O14627* / Q07424* / caudal type homeobox 4* / Homeobox protein CDX-4 *ENSGALG0000000765622
CDX1 / Q9DEB6 / Homeobox protein CDX-1 / P18111* / P47902* / caudal type homeobox 1*ENSGALG0000000567922
CDX4 / O14627* / Q07424* / caudal type homeobox 4* / Homeobox protein CDX-4 *ENSGALG0000000765721


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR001827  Homeobox protein, antennapedia type, conserved site
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR017995  Homeobox protein, antennapedia type
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IEA
 biological_processGO:0002009 morphogenesis of an epithelium IEA
 biological_processGO:0003016 respiratory system process IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007389 pattern specification process IEA
 biological_processGO:0007585 respiratory gaseous exchange IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0010870 positive regulation of receptor biosynthetic process IEA
 biological_processGO:0016477 cell migration IEA
 biological_processGO:0016525 negative regulation of angiogenesis IEA
 biological_processGO:0030324 lung development IEA
 biological_processGO:0030878 thyroid gland development IEA
 biological_processGO:0033599 regulation of mammary gland epithelial cell proliferation IEA
 biological_processGO:0035264 multicellular organism growth IEA
 biological_processGO:0043065 positive regulation of apoptotic process IEA
 biological_processGO:0045639 positive regulation of myeloid cell differentiation IEA
 biological_processGO:0045647 negative regulation of erythrocyte differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048286 lung alveolus development IEA
 biological_processGO:0048704 embryonic skeletal system morphogenesis IEA
 biological_processGO:0048706 embryonic skeletal system development IEA
 biological_processGO:0060435 bronchiole development IEA
 biological_processGO:0060439 trachea morphogenesis IEA
 biological_processGO:0060441 epithelial tube branching involved in lung morphogenesis IEA
 biological_processGO:0060480 lung goblet cell differentiation IEA
 biological_processGO:0060481 lobar bronchus epithelium development IEA
 biological_processGO:0060484 lung-associated mesenchyme development IEA
 biological_processGO:0060535 trachea cartilage morphogenesis IEA
 biological_processGO:0060536 cartilage morphogenesis IEA
 biological_processGO:0060574 intestinal epithelial cell maturation IEA
 biological_processGO:0060638 mesenchymal-epithelial cell signaling IEA
 biological_processGO:0060644 mammary gland epithelial cell differentiation IEA
 biological_processGO:0060749 mammary gland alveolus development IEA
 biological_processGO:0060764 cell-cell signaling involved in mammary gland development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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